Gene Psyr_3140 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_3140 
Symbol 
ID3368661 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp3765986 
End bp3766708 
Gene Length723 bp 
Protein Length240 aa 
Translation table11 
GC content58% 
IMG OID637653485 
Productphospholipase/carboxylesterase 
Protein accessionYP_236210 
Protein GI66046369 
COG category[R] General function prediction only 
COG ID[COG0400] Predicted esterase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0649605 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.347756 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGAAAT TTTTCGCTGC CTTACTGTTT GCCGTTACCG CAATGGCGCA GGCGCAGGAC 
ACCTTGCACA CGGACCTGCC GCTCGATTAT CTGGCGCAGA CCAATGTCGA CAAGCCTGAC
CAGCCGCTGG TGATTTTCAT CCACGGCTAC GGCAGCAATG CCGCCGACCT GTTCGGGCTC
AAGGAAGAGC TTCCGGCCGA CTACAACTAT GTGTCGGTAC AGGCGCCGAT GGAGTTGCGT
GCTGACAGCT ACAAGTGGTT CACCCAGAAG CCCGGCGTCG CGGATTATGA CGGTGTGACC
GAAGACCTGA AAAGCAGCGG TACCCGGTTG GCTGCGTTCA TCGGCAAAGC CACTGAGAAG
TTTCATACCC AGCCAGGCAA GGTCTTCCTG ATCGGTTTCA GCCAGGGCGC AATGATGAGT
TATGAAGTCG CCCTGCGACA GCCAAAACTG GTCGGCGGTT TTGCGGCATT GAGCGGACGG
CTGCTGCCGG TCGTGAAGTC CGAGGTCAAA ACCTCCGACG ACCTCAAGGC CCTGAGCGTA
TTCATCGGTC ACGGCACCCA GGATCGCCAG GTAGCCTATG CCAGTGCACC GCAAGCCGAG
GCGACGTTGA AAACGCTCGG TCTGACGCCA CAGTTACATG CCTATGAAGG CATGGGGCAC
AGCATCAACG AGGCTGAAGT GATGGATCTG GCGGCTTGGT TGAAGCAGTC AAACCGCCAG
TGA
 
Protein sequence
MLKFFAALLF AVTAMAQAQD TLHTDLPLDY LAQTNVDKPD QPLVIFIHGY GSNAADLFGL 
KEELPADYNY VSVQAPMELR ADSYKWFTQK PGVADYDGVT EDLKSSGTRL AAFIGKATEK
FHTQPGKVFL IGFSQGAMMS YEVALRQPKL VGGFAALSGR LLPVVKSEVK TSDDLKALSV
FIGHGTQDRQ VAYASAPQAE ATLKTLGLTP QLHAYEGMGH SINEAEVMDL AAWLKQSNRQ