Gene Psyr_3135 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_3135 
Symbol 
ID3368656 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp3760685 
End bp3761428 
Gene Length744 bp 
Protein Length247 aa 
Translation table11 
GC content60% 
IMG OID637653480 
Producttranscriptional regulator GntR 
Protein accessionYP_236205 
Protein GI66046364 
COG category[K] Transcription 
COG ID[COG2188] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATAAAA TAATGAACAA GCTTTCCAGC GACGAACGTC TACCGCTTTA TCAGCGCCTG 
CGCGACAGCC TGGCGCAACA GATCGCCAAC AATCGCTGGC GTCCGGGTGA GGCGATTCCT
ACCGAAGCGG CTTTGTCTGC CGAGTATTGC CTGTCCACCG GCACGGTGCG CAAGGCCATT
GATCTGCTGG TCAGTGACAA CATTCTGGAG CGTCAGCAGG GGCGTGGCAC GTTCATTCGT
CGTGCGCAGT TTCAGTCTTC GCTGTTTCGT TTTTTCCGTT TTCAAACCGA AGCGGGTGAA
CGCCGGGTGC CGGAAAGCCG GATTTTGTCC GTCGAGCCTG TGGACGCGCC TTCGTCGGTC
GCTCAGGCGT TGGGGATGGC CGCCGGTGCC CCGGTGATTC GTATGGTCCG CTTGCGGTTG
ATGGATGGCC AGCCGGTGCT GGCCGAAGAG ATCTGGCTGC CACGTGCGCG GTTTCAGGCA
TTGCTGGAGC TTGACCTCGA TACGCAGGGG CCATTGCTTT ATCCGATCTA CGAAGACGCC
TGCGGTCAGG TGGTCGCCTG TGCGCAAGAA AGCCTGACGG CCGAGACGGT CAACGACGTG
TACGGCCGGC TGCTGCAGAT TCCGGTCGGC AGTGCGGTGG TGGTCATCGA ACGCCTGGCG
CTCAATTACG CGGGTGAACC TCTGGAATGG CGTCGTTCGC GAGGGCACGC CAGTCATTTC
CGCTACAGCG TGGAAATTCG CTGA
 
Protein sequence
MNKIMNKLSS DERLPLYQRL RDSLAQQIAN NRWRPGEAIP TEAALSAEYC LSTGTVRKAI 
DLLVSDNILE RQQGRGTFIR RAQFQSSLFR FFRFQTEAGE RRVPESRILS VEPVDAPSSV
AQALGMAAGA PVIRMVRLRL MDGQPVLAEE IWLPRARFQA LLELDLDTQG PLLYPIYEDA
CGQVVACAQE SLTAETVNDV YGRLLQIPVG SAVVVIERLA LNYAGEPLEW RRSRGHASHF
RYSVEIR