Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_3135 |
Symbol | |
ID | 3368656 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | - |
Start bp | 3760685 |
End bp | 3761428 |
Gene Length | 744 bp |
Protein Length | 247 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637653480 |
Product | transcriptional regulator GntR |
Protein accession | YP_236205 |
Protein GI | 66046364 |
COG category | [K] Transcription |
COG ID | [COG2188] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATAAAA TAATGAACAA GCTTTCCAGC GACGAACGTC TACCGCTTTA TCAGCGCCTG CGCGACAGCC TGGCGCAACA GATCGCCAAC AATCGCTGGC GTCCGGGTGA GGCGATTCCT ACCGAAGCGG CTTTGTCTGC CGAGTATTGC CTGTCCACCG GCACGGTGCG CAAGGCCATT GATCTGCTGG TCAGTGACAA CATTCTGGAG CGTCAGCAGG GGCGTGGCAC GTTCATTCGT CGTGCGCAGT TTCAGTCTTC GCTGTTTCGT TTTTTCCGTT TTCAAACCGA AGCGGGTGAA CGCCGGGTGC CGGAAAGCCG GATTTTGTCC GTCGAGCCTG TGGACGCGCC TTCGTCGGTC GCTCAGGCGT TGGGGATGGC CGCCGGTGCC CCGGTGATTC GTATGGTCCG CTTGCGGTTG ATGGATGGCC AGCCGGTGCT GGCCGAAGAG ATCTGGCTGC CACGTGCGCG GTTTCAGGCA TTGCTGGAGC TTGACCTCGA TACGCAGGGG CCATTGCTTT ATCCGATCTA CGAAGACGCC TGCGGTCAGG TGGTCGCCTG TGCGCAAGAA AGCCTGACGG CCGAGACGGT CAACGACGTG TACGGCCGGC TGCTGCAGAT TCCGGTCGGC AGTGCGGTGG TGGTCATCGA ACGCCTGGCG CTCAATTACG CGGGTGAACC TCTGGAATGG CGTCGTTCGC GAGGGCACGC CAGTCATTTC CGCTACAGCG TGGAAATTCG CTGA
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Protein sequence | MNKIMNKLSS DERLPLYQRL RDSLAQQIAN NRWRPGEAIP TEAALSAEYC LSTGTVRKAI DLLVSDNILE RQQGRGTFIR RAQFQSSLFR FFRFQTEAGE RRVPESRILS VEPVDAPSSV AQALGMAAGA PVIRMVRLRL MDGQPVLAEE IWLPRARFQA LLELDLDTQG PLLYPIYEDA CGQVVACAQE SLTAETVNDV YGRLLQIPVG SAVVVIERLA LNYAGEPLEW RRSRGHASHF RYSVEIR
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