| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_3131 |
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| Symbol | |
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| ID | 3368652 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. syringae B728a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007005 |
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| Strand | + |
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| Start bp | 3754317 |
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| End bp | 3755408 |
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| Gene Length | 1092 bp |
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| Protein Length | 363 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637653476 |
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| Product | secretion protein HlyD |
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| Protein accession | YP_236201 |
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| Protein GI | 66046360 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.735534 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCACCT CGTACGCAGA AACACGAACC AGATCCCGCT GCTGGCTGAT CTGCATTCTG
ATCGTGGCTC TGCCGGGCTG CCGCGACAAA CCGCTTCGCG AGGTTGTCGA ACGCCCGGTA
CTGTTCACCG AAATAGTCGA TCAGCGCAGC GCCTCTCATG GCCGCTTCGC CGGCGTCATT
CAGCCGCAGT ATGAAGTGGC ATTGGGGTTT CGCGTCGCAG GGCGACTGGC AAGCCGGCAT
GCGGAGATCG GTGATCGGGT GCGCAAGGGC GATCTGCTCG CCACGCTGGA ACCCGGCGAC
CAGCAACACC GTTTGCGTGC CCGCCAGGCA GAACTCGGCA AAGCCCAATC CGCCTGGCAA
CAGGCACGCG ATGAATTGAC GCGCTACCAG CAACTCTATG AGCGCGGTAT CGGCTCGCGA
GCGCGAATGG ATCAGCTGGA CAACGACCTG CGCACTCAGG ACGCGCTGCG CAATCAGGCC
CGCGTCGCGG TGCAGCAAGC CGGTGATCAT GTGTCCTACA CACATTTGTC AGCCGAGTTC
GATGGCCTGA TCACAGGATG GCAAGCCGAA GTCGGCCAGG TCATGGCGAC CGGTCAGGCA
GTGGTCAGTC TTGCGCGCCC GGACAGCCGT GAAGCGGTCG TCGACTTGCC ACTCGGTTCG
CTGGATGAAC GCCACCGCAT CAGAGTGATT TCGCAAATCA ACGAACAGCT TTCAGTGGCC
GCGGACGTCC GCCAGCTTGC GCCGCAAATC AATGCCGAGA CCCGCACTCA GCGCGTCCGC
CTGGCCTTGC AGAACCCTGC GGACAGCTTT CGCCTGGGCT CGACCGTCAC GGTAGAGATC
AGTGGCGACG CGCCGGCGTT TCATGAGCTG CCCGGCAGCG CAGTGCTGCA GCGTGACGGC
ACGTATCAGG TGTGGGTGAT CGACCCAACG ACATCGACAC TGGTCCCGCG CGCGGTGCAG
GTACTGGCGC GATCAGGCTC GACGGTAAGG GTCAGCGGCG CGCTGCACGA GGGCGAAAAA
GTAGTGACTG CCGGAGTCAA CGGCATGCAG TCCGGACAGA AGATCCGCCT GCAGCGAGAG
GTCAGTTTGT GA
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| Protein sequence | MSTSYAETRT RSRCWLICIL IVALPGCRDK PLREVVERPV LFTEIVDQRS ASHGRFAGVI
QPQYEVALGF RVAGRLASRH AEIGDRVRKG DLLATLEPGD QQHRLRARQA ELGKAQSAWQ
QARDELTRYQ QLYERGIGSR ARMDQLDNDL RTQDALRNQA RVAVQQAGDH VSYTHLSAEF
DGLITGWQAE VGQVMATGQA VVSLARPDSR EAVVDLPLGS LDERHRIRVI SQINEQLSVA
ADVRQLAPQI NAETRTQRVR LALQNPADSF RLGSTVTVEI SGDAPAFHEL PGSAVLQRDG
TYQVWVIDPT TSTLVPRAVQ VLARSGSTVR VSGALHEGEK VVTAGVNGMQ SGQKIRLQRE
VSL
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