Gene Psyr_3129 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_3129 
Symbol 
ID3368650 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp3752172 
End bp3753035 
Gene Length864 bp 
Protein Length287 aa 
Translation table11 
GC content54% 
IMG OID637653474 
Product3-hydroxyacyl-CoA-acyl carrier protein transferase 
Protein accessionYP_236199 
Protein GI66046358 
COG category[R] General function prediction only 
COG ID[COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)  
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGCGCAC AATCGAAGAT TCTAACAATC GGTAAGTACA AGGTTTACGC CGAGACTTAC 
TGGAAAGGCA GCGACGCCAA GACCATTCTG CTGGTCAACG GTGCACTGTC GACCACGGGC
TCTTTCGGGC AGACGGTCAA GTACTTGCAA CCGCACTACA ACCTGGTGCT GTTCGACCTG
CCGTTTTCGG GGCAATCCCG AGCGCACAAC CCGGACGACA TGATTGTCAG CAAGGAAGAC
GAAGTAAACA TTCTCCTGCA ACTGATTGAT CTCTATCAGG TAAACCACCT GTTGTCGGTC
TCCTGGGGCG GTGTATCGGC CCTGCTGGCG CTCTCCGAAT GTCCTCCGTC CGTGGAGAAG
GCCATCATCA GCTCGTTCTC GCCGGTCCTC AACGAGGCCA TGCTCGACTA TATCGACAAC
GCCCAGGTCT ACCTCGCCGC ACGTGAAAAA CGCAAGATCG GCTCACTGCT CAACGACACC
GTGGGAAAGT ACCTGCCACG CCTGTTCAAA CTCTATAACT ACAAGCACCT GATCAGTCTT
GCCGAGCACG AATATCGCCA GATCGACTTT CATATCAGCC AGATTCGCCA ACTAAGCGCC
AGTAACTACG TCGAGCGTTT CTCCTCGATC AACATTCCGG TGCTGTTCAT CAACGGTGAA
AAAGATGAAT ACACCACCGT TGAAGATGCC CGCATGTTTT CCAACTACAT CGCCAAAAGC
AGTTTCAACG TCGTTCCGGA CACCGGGCAC TTTCTGGACC TGGAAAGCAA GGCGGCGTGG
CACCACTCGC AAAGAAACGT ACTGACATTT CTGGGCACTG AAGCTACCCA GGAGGTTTGG
CCCAGCGTCA CCGCGATGGC CTGA
 
Protein sequence
MGAQSKILTI GKYKVYAETY WKGSDAKTIL LVNGALSTTG SFGQTVKYLQ PHYNLVLFDL 
PFSGQSRAHN PDDMIVSKED EVNILLQLID LYQVNHLLSV SWGGVSALLA LSECPPSVEK
AIISSFSPVL NEAMLDYIDN AQVYLAAREK RKIGSLLNDT VGKYLPRLFK LYNYKHLISL
AEHEYRQIDF HISQIRQLSA SNYVERFSSI NIPVLFINGE KDEYTTVEDA RMFSNYIAKS
SFNVVPDTGH FLDLESKAAW HHSQRNVLTF LGTEATQEVW PSVTAMA