| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_3122 |
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| Symbol | |
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| ID | 3368643 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. syringae B728a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007005 |
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| Strand | + |
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| Start bp | 3742857 |
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| End bp | 3743813 |
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| Gene Length | 957 bp |
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| Protein Length | 318 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637653467 |
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| Product | D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding |
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| Protein accession | YP_236192 |
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| Protein GI | 66046351 |
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| COG category | [C] Energy production and conversion
[H] Coenzyme transport and metabolism
[R] General function prediction only |
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| COG ID | [COG1052] Lactate dehydrogenase and related dehydrogenases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCCCAT TGAAAATCGC GGTACTCGAT GACTGGCAAA ACGTCGCCAG CACTGTAGTG
GACTGGTCCG TGCTCGGCTC AATGGGCGAG ATCAGTTTTC TGCATGACTA CCCTGCCGAT
ACATCGACCA TGGCGCGGCG CCTGCGAGAC TTCGACATCA TTTGCGTGAT GCGCGAGCGA
ACCCTGTTCG ATGCGACATT GCTCAGCCAG CTGCCGGCGC TGAAACTGCT GGTCACCGGC
GGCATGCGCA ATGCGGCGAT TGATACCGCT GCGGCCAAGC GTCAGGGCAT TGTCGTGTGT
GGAACAGAAA GCTATAAGCA TGCGGCACCG GAGCTGACCT GGGCGCTGAT CATGGGCATC
ACCCGCAACC TGGTGGCCGA GGCCAACGCG TTGCGTGCCG GCAATTGGCA GGTCGGGCTG
GGCAGCGATC TGCATGGCAA AACCCTGGGC ATTCTCGGCC TGGGCAGTAT CGGTAAGTGG
ATCGCCCGCT ACGGGCAGGC ATTCGGCATG AAGGTCATTG CCTGGAGCCA GAACCTGACG
CCAGAGGCTG CTGCCGAGTC CGGCGTCACC TATGTCAGCA AACAGCAACT GTTCGAACAG
GCCGATGTGC TGTCGGTACA CCTGGTGCTC AGCGATCGCA GCCGTGGCCT GGTGGACGCA
GAAGCACTGA ACTGGATGAA GCCCGGCGCT TATCTGATCA ATTCGTCACG CGGCCCGATC
ATCGATCAGG CCGCGCTGAT CGAAACACTG CAGCAGCGCA GAATCTCCGG CGCAGCGCTG
GACGTCTTCG ACATCGAACC GCTGCCGGCC GACCACCCGT TCCGTACCCT GGACAACGTG
CTGGCGACCC CGCACATCGG GTACGTCACC GAGAACAACT ACCGGACTTT CTACGGGCAG
ATGATCGAAG ACATCCAGGC GTGGCATGCG GGGTCGCCCA TTCGGGTGTT TGACTGA
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| Protein sequence | MTPLKIAVLD DWQNVASTVV DWSVLGSMGE ISFLHDYPAD TSTMARRLRD FDIICVMRER
TLFDATLLSQ LPALKLLVTG GMRNAAIDTA AAKRQGIVVC GTESYKHAAP ELTWALIMGI
TRNLVAEANA LRAGNWQVGL GSDLHGKTLG ILGLGSIGKW IARYGQAFGM KVIAWSQNLT
PEAAAESGVT YVSKQQLFEQ ADVLSVHLVL SDRSRGLVDA EALNWMKPGA YLINSSRGPI
IDQAALIETL QQRRISGAAL DVFDIEPLPA DHPFRTLDNV LATPHIGYVT ENNYRTFYGQ
MIEDIQAWHA GSPIRVFD
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