Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_3121 |
Symbol | |
ID | 3368642 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | + |
Start bp | 3742161 |
End bp | 3742814 |
Gene Length | 654 bp |
Protein Length | 217 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 637653466 |
Product | hypothetical protein |
Protein accession | YP_236191 |
Protein GI | 66046350 |
COG category | [S] Function unknown |
COG ID | [COG4291] Predicted membrane protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCGCCACC TCGCCCGCAC CCGCCCTCGC CTTACCCTTG CCGCTCTGGT CGGCCTGACC GCAGGCATCG CCTGGTCCTG GCTCATCCCT CACTCGACAC TGACCCAGAG CCTGCTGACT GGCTGGGACA CGGGAGTATG GCTTTATCTG ATCATGATTT TCATCCGCAC GTTGCGCAGC GACGCTGAGG ATGTGCGGCG AGTCGCCATG AGGGAAGACG AAAACGCAGG CGTCATTCTG GTCACGGTCT GCGTTGCGGC ACTGGCCAGT CTGGCCGCCA TCATTTTTGA AATCGCCGGC AGCAAAGGCC TTTCCAACGA CGCCAGAATG CTTCACCACG CCTTCACCGG CCTGACAGTC ATCGGTTCCT GGCTGATGAT CGGCGTGATC TTCAGCCTGC ATTACGCACG CATGTTCTAC ACCTGGAAAG GCAAGGAGCC CGCACTGGCG TTTGTGGGCG GTGAAAAGAA CCCCGATTAC TGGGACTTTC TGTACTTTTC GTTCACCATC AGCGTCGCGG TGCAAACCTC CGACGTCGGC GTAGCGACGC GCGAAATGCG CAAGGTCGTG CTCGGCCAGT CGTTGATCTG CTTTGTGTTC AACACCGCGA TTCTGGGCTT TTCGATCAAT ATCGCCGCCA GCCTGTTCAA TTAG
|
Protein sequence | MRHLARTRPR LTLAALVGLT AGIAWSWLIP HSTLTQSLLT GWDTGVWLYL IMIFIRTLRS DAEDVRRVAM REDENAGVIL VTVCVAALAS LAAIIFEIAG SKGLSNDARM LHHAFTGLTV IGSWLMIGVI FSLHYARMFY TWKGKEPALA FVGGEKNPDY WDFLYFSFTI SVAVQTSDVG VATREMRKVV LGQSLICFVF NTAILGFSIN IAASLFN
|
| |