| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_3120 |
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| Symbol | |
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| ID | 3368641 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. syringae B728a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007005 |
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| Strand | + |
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| Start bp | 3740656 |
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| End bp | 3742008 |
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| Gene Length | 1353 bp |
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| Protein Length | 450 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637653465 |
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| Product | glucarate dehydratase |
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| Protein accession | YP_236190 |
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| Protein GI | 66046349 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[R] General function prediction only |
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| COG ID | [COG4948] L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily |
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| TIGRFAM ID | [TIGR03247] glucarate dehydratase |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACATTC AGCAATCCAA TATCACCAGC AAGGCCCCCG TCATTACCGA GATGCAGGTT
GTGCCCGTAG CGGGCCATGA CGACATGCTG CTCAACCTGA GCGGTGCACA TGGCCCCTAC
TTCACCCGCA ACGTAGTCAT TCTCAAGGAC AACGCAGGGC ATGTCGGTGT GGGCGAAGTG
CCTGGCGGCG AGCTGATTCG CCAGACGCTG GAAGACGCGC GATCGCTGGT CGTCGGCAGC
AGCATTGGCA CTTACCAGAA AATCCTCAAC CAGGCACGCA AGGCGTTTGC CGATCGGGAC
TCCGGTGGCC GTGGCTTGCA GACGTTCGAC CTGCGCATTG CCATTCATGC GGTCACCGCG
CTGGAAGCGG CGCTCCTCGA CCTGCTCGGC CAGCATCTGG AAGTACCGGT TGCGGCATTG
CTGGGCGAAG GTCAGCAACG CGATCAGGTT GAAATGCTCG GTTACCTGTT TTATGTCGGC
GACCAGCGCA AGACCGATCT GGCCTACCGC AGCGAACCCG AGGCCGACAA CGACTGGTTC
CGTATCCGCC ATGAAGAAGC ACTGACGCCC GAGGCCGTGG TGCGCCTGGC CGAAGCCGCG
CATCAGCGTT ACGGCTTTCA GGACTTCAAG CTCAAGGGCG GCGTGTTGAG CGGCGACCAG
GAGATCGAAG CGGTGACGGC GCTCGCCGAA CGCTTCCCCG ATGCACGCAT CACGCTGGAC
CCGAACGGTG CCTGGTCGCT CAAGGAAGCA ATCCGTCTGT GCCGCGATCA GCATCATGTG
CTGGCCTACG CCGAAGACCC GTGCGGCGCG GAAAACGGTT ATTCCGGTCG TGAAGTGATG
GCCGAGTTCC GCCGCGCTAC CGGCCTCAAG ACGGCCACCA ACATGATAGC CACCGACTGG
CGGGAAATGG GTCACGCCAT TCAGTTGCAG TCGGTGGACA TTCCACTGGC CGACCCGCAT
TTCTGGACCA TGCAGGGCTC GGTACGGGTG GCGCAGATGT GCAACGAGTG GGGCCTGACC
TGGGGCTCGC ACTCCAACAA CCATTTTGAT ATTTCCCTGG CGATGTTCAC CCACGTGGCC
GCTGCAGCGC CGGGCACTAT CACGGCGATC GATACCCACT GGATCTGGCA GGACGGACAG
CGTCTGACCA AGGCGCCGCT GCAAATCGTC GGTGGCAAGG TCGAGGTCCC GAACAAACCG
GGGCTCGGTG TCGAGCTGGA CATGGACCAG CTGGCCAAGG CTCATGAACT GTACAAAGGC
ATGGGCCTGG GCGCTCGCAA TGACGCAGTG GCCATGCAGT TTCTGATCCC GGACTGGACA
TTCAACAACA AGCAGCCTTG CCTGGTGCGT TGA
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| Protein sequence | MNIQQSNITS KAPVITEMQV VPVAGHDDML LNLSGAHGPY FTRNVVILKD NAGHVGVGEV
PGGELIRQTL EDARSLVVGS SIGTYQKILN QARKAFADRD SGGRGLQTFD LRIAIHAVTA
LEAALLDLLG QHLEVPVAAL LGEGQQRDQV EMLGYLFYVG DQRKTDLAYR SEPEADNDWF
RIRHEEALTP EAVVRLAEAA HQRYGFQDFK LKGGVLSGDQ EIEAVTALAE RFPDARITLD
PNGAWSLKEA IRLCRDQHHV LAYAEDPCGA ENGYSGREVM AEFRRATGLK TATNMIATDW
REMGHAIQLQ SVDIPLADPH FWTMQGSVRV AQMCNEWGLT WGSHSNNHFD ISLAMFTHVA
AAAPGTITAI DTHWIWQDGQ RLTKAPLQIV GGKVEVPNKP GLGVELDMDQ LAKAHELYKG
MGLGARNDAV AMQFLIPDWT FNNKQPCLVR
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