Gene Psyr_3116 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_3116 
Symbol 
ID3368637 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp3734794 
End bp3735885 
Gene Length1092 bp 
Protein Length363 aa 
Translation table11 
GC content63% 
IMG OID637653461 
Productputative sugar diacid recognition 
Protein accessionYP_236186 
Protein GI66046345 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG3835] Sugar diacid utilization regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCGCCC TTGACCGAGC GCTGGCCCAG GACATCGTCG ACCGGGCCAT GGCCATCCTG 
CCGTACAACG TCAATGTCAT GGACTACCTG GGCATCATCA TCGGCAGCGG TGATGCCGAG
CGCTTGTGTA CCCGTCATGA GGGTGCGCAG CGAGTGCTGG CCAACCGGCA GGTGGTGGAA
ATCGATTCTC TGGCAGCGTC GCAGCTCGGG GGTGTCAAGC CGGGCGTCAA TCTACCGCTG
ATGCTCGATC ATCAACTGGT GGGCGTGCTC GGCATCACCG GCGAGCCGGA CGAGGTGCGG
GTGTATGGCG AATTGGTCAA GATGACTGCC GAGATGCTCA TGGAACAGCG TCGTCAGCAG
GCTGACCTTC AGTGGCGGGC GCAACGCAGC GAAGACCTGC TGGCTCGCCT GCTGTTGCCG
GATTGTCCCG ATAGCCTGGT GGATGAAGCA CGACAGTTGG GTTTGCAGCC GCACATTGCG
CGCCAGGTGG TACTGCTGCA GTTTGCCGAG GAGGGGCTGG CTGCCAGCCA GGTTGCCAAA
TGGCTTGGCA CGCGCTATGC CGACAGCTGG TGCGTGCTGC GTGAGCCGAC CTTGCTGTAC
TGGTGCCGCG CGACGGGCAA GGAGCGTGAC GATGCGCTGC TGCTCAAGCA GTTCGATGAA
CACCACTGGC CAGTGCTGCG TATGGCCACC GTGGCGCAAT CGGCGGACCT GCCCACCCTG
CGCCAGGCCT GCGCGGCAGC GCGGGATCTG CTCGACTACG CCCGTCAGGC AAGGCCGGCG
CAGCGCCTGC TGCGTCTTGA AGCCTATCGG CTGCCAGTGC TGTTCTGGCG TTACCGGCAT
GACTGGCTGG CCGAACACGT CGCCGAGCCA ATGGAGCGTC TGCACGCGCA TGCGCAACTG
CTCGACACCT TGTGCAAATG GTTCGAGTAC AGCGGCGAAA GTCAGGCCTG CGCCGAAGCG
CTGGGTATCC ATCGCAACAG CCTGCGCTAC CGGCTGGAGA AGATTGGTGA GTTGACGGGC
TGCGACCCTT ACAAGACCGA CGACCTGCTG CAACTCTACC TGGGCGCGCA GATGATCACT
CGTCAGACCT GA
 
Protein sequence
MFALDRALAQ DIVDRAMAIL PYNVNVMDYL GIIIGSGDAE RLCTRHEGAQ RVLANRQVVE 
IDSLAASQLG GVKPGVNLPL MLDHQLVGVL GITGEPDEVR VYGELVKMTA EMLMEQRRQQ
ADLQWRAQRS EDLLARLLLP DCPDSLVDEA RQLGLQPHIA RQVVLLQFAE EGLAASQVAK
WLGTRYADSW CVLREPTLLY WCRATGKERD DALLLKQFDE HHWPVLRMAT VAQSADLPTL
RQACAAARDL LDYARQARPA QRLLRLEAYR LPVLFWRYRH DWLAEHVAEP MERLHAHAQL
LDTLCKWFEY SGESQACAEA LGIHRNSLRY RLEKIGELTG CDPYKTDDLL QLYLGAQMIT
RQT