Gene Psyr_3113 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_3113 
Symbol 
ID3368634 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp3730375 
End bp3731619 
Gene Length1245 bp 
Protein Length414 aa 
Translation table11 
GC content62% 
IMG OID637653458 
ProductN-acylglucosamine 2-epimerase 
Protein accessionYP_236183 
Protein GI66046342 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2942] N-acyl-D-glucosamine 2-epimerase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATAACA ATAATCAAAC CTTCAGCAGT TGGCTGCGCT CGCCAGCCCA TCACCAGTGG 
CTGGCACTGG AAGGCAATCG TCTGTTGACC TTCGCCAAGG CTTCGAGGCT GGACAACGGC
TTTGGCAGTC TTGATGACTA CGGTCGGCTG ATGGTCGGTG CCACCGCAGG AACCATGAAC
ACGGCACGCA TGACCCACTG TTTTGCCATG GCGCATGCGC AGGGTATTCC CGGCTGCGCT
GCGCTGGTCG ATCACGGTAT CGCCGCACTG CGCGGACCGT TGCACGATGC CGAGCACGGC
GGCTGGTTCA GTGCCGCGCT CGAAGACGGC GGCAAGACTG ACAAACAGGC TTATCTGCAT
GCGTTCGTCG CACTGGCGGC CAGCTCTGCC GTGGTGGCGG GGCGGCCTGG TGCGCAGGCA
TTGCTGTCCG ACGCCATCCA GGTGATCCAG ACGCATTTCT GGAGCGAGCA GGAAGGCGCC
ATGCGTGAGT CATTCGCGCG GGACTGGAGC AGTGAAGAGT CGTATCGCGG TGCCAACAGC
AACATGCACA GCACCGAAGC CTTCCTTGCG CTCGCCGATG TGACGGGTGA CGCGCAATGG
CTCGACCGGG CGCTGAGCAT TGTCGAGCGG GTTATCCATG AGCATGCCGG CGCCAACAAC
TTTCAGGTCA TCGAGCATTT CACCCAGGAT TGGCAGCCGC TGGCCGATTA CAACCGGGAA
AACCCGGCCG ACGGTTTCCG GCCCTTCGGC ACCACGCCGG GGCATGCCTT CGAATGGTCG
CGGCTGGTGT TGCATCTGGA GGCCGCGCGC CGTCAGGCTG GACGCGCCAA CCCCGAATGG
TTGCTGGACG ATGCCCGCCA ACTGTTTGCC AATGCCTGCC GGTACGGTTG GGATGTCGAC
GGTGCCGCGG GTATCGTCTA CACCCTCGAC TGGCAGAACG AACCGGTGGT CCGTCACCGT
CTGCACTGGA CTCATTGCGA AGCGGCCGCC GCTGCCGCCG CATTGCTACA ACGTACCGGC
GAGCAGCAGT ATGAAGACTG GTATCGCTGT TTCTGGGAGT TCAACGAGAC CCTGTTCATC
GATCACGAGC ATGGCAGCTG GCGCCATGAA CTGAACGAAC GCAACGAGCC CAGCGCAGAC
GTATGGCCCG GCAAGCCGGA CCTTTACCAC GCCTATCAGG CCACGTTATT GCCGGTGTTG
CCCTTGGCGC CAAGCCTGGC CAGCGCCCTG GCGGGGCTGG AATGA
 
Protein sequence
MNNNNQTFSS WLRSPAHHQW LALEGNRLLT FAKASRLDNG FGSLDDYGRL MVGATAGTMN 
TARMTHCFAM AHAQGIPGCA ALVDHGIAAL RGPLHDAEHG GWFSAALEDG GKTDKQAYLH
AFVALAASSA VVAGRPGAQA LLSDAIQVIQ THFWSEQEGA MRESFARDWS SEESYRGANS
NMHSTEAFLA LADVTGDAQW LDRALSIVER VIHEHAGANN FQVIEHFTQD WQPLADYNRE
NPADGFRPFG TTPGHAFEWS RLVLHLEAAR RQAGRANPEW LLDDARQLFA NACRYGWDVD
GAAGIVYTLD WQNEPVVRHR LHWTHCEAAA AAAALLQRTG EQQYEDWYRC FWEFNETLFI
DHEHGSWRHE LNERNEPSAD VWPGKPDLYH AYQATLLPVL PLAPSLASAL AGLE