| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_3112 |
|---|
| Symbol | |
|---|
| ID | 3368633 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas syringae pv. syringae B728a |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007005 |
|---|
| Strand | + |
|---|
| Start bp | 3729253 |
|---|
| End bp | 3730341 |
|---|
| Gene Length | 1089 bp |
|---|
| Protein Length | 362 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 637653457 |
|---|
| Product | putative ammonia monooxygenase |
|---|
| Protein accession | YP_236182 |
|---|
| Protein GI | 66046341 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG3180] Putative ammonia monooxygenase |
|---|
| TIGRFAM ID | [TIGR03082] membrane protein AbrB duplication |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.536468 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGTCAAACG CTTCACGCTT TTCGCTTTCC TCCCTTTCCC CGCTGACTCA ATGGGCGGGT
CTGATCCTGA TAGCCGGCAT TGCCGGGCAA CTGCTCAAAC TGTTCGATAT GCCTGCTGCG
ATGTTCCTCG GGCCCATGCT GGTCGCCATC GGCTTTGGTG TTTCAGGCGC CAGCATCCGT
ATGCCCAAGC GGGCCTTTCA ACTCGGTCAG GGCACGGTCG GCGTGCTGAT CGCGCATGCC
ATGTCGGTCA GCGTGCTGCT CACCGCCCTT CATTCATGGC ACGTCATGCT TCTGGCGACG
ATCCTCACGG TGGTGCTGAG CGCGGCGGTT GGACTGGTGC TGGTGCGCTT TGCCGGTATC
CCGAGCAATA CCGCAGCCTG GGGCACGTCA CCGGGCGCGG CTTCGGCAAT GGTCGCGATG
TCCGAGGATT ACGGTGCCGA CTCGCGCATC GTCGCCACCA TGCAATATGT GCGCGTCGTC
TGCGTGGTCA CCATCGGCGC GCTGGTCAGC CATTTCATCG GCATACCGGA TTCAGCTGCG
GCGCTGCACA GCAGTGCAGC GGCATTGCCC AGCCTGAACG TTGTCGACCT GGCGCTGAGC
CTGGCAGTCA TTGTCGCTGG CGTGGCAGTC GGTTCGCGTC TTCCGGCAGG TGCCTTGCTG
GTGCCACTGA TGCTGGGCGG CGCGCTGCAA CTGAGTGGGG TAATGCAGAT CACCGTCCCG
GCGTGGTTGC TGCCCATCGC TTACGGTGCC ATAGGCTGCT ACGTCGGGCT GCGTTTCGAC
CGGCCGACGG TACAATACGT CTGGAGACGG CTGCCGATGA TGATTCTGGC CTCATTGCTG
TTGATCGTGC TCTGCGCCGT GTCGGCCTGG CTGATTGCCG TGATGATGGG CAAGGATTAT
CTCTCGGTGT ACCTGGCGAC CAGCCCGGGC GGCCTGGACA CCATGGCCAT TATTGCCATC
GATACGCACG CCGACGTCGG TTTCGTATTG GCCATGCAGA CCCTGCGCCT GTTCGGCGTG
ATCCTGACCG GCAGCTTCCT GGCCCGGCAG ATCATTCGCC TGACCGACAA ACGCATCCCT
GCGCTTTGA
|
|---|
| Protein sequence | MSNASRFSLS SLSPLTQWAG LILIAGIAGQ LLKLFDMPAA MFLGPMLVAI GFGVSGASIR
MPKRAFQLGQ GTVGVLIAHA MSVSVLLTAL HSWHVMLLAT ILTVVLSAAV GLVLVRFAGI
PSNTAAWGTS PGAASAMVAM SEDYGADSRI VATMQYVRVV CVVTIGALVS HFIGIPDSAA
ALHSSAAALP SLNVVDLALS LAVIVAGVAV GSRLPAGALL VPLMLGGALQ LSGVMQITVP
AWLLPIAYGA IGCYVGLRFD RPTVQYVWRR LPMMILASLL LIVLCAVSAW LIAVMMGKDY
LSVYLATSPG GLDTMAIIAI DTHADVGFVL AMQTLRLFGV ILTGSFLARQ IIRLTDKRIP
AL
|
|---|
| |