Gene Psyr_3101 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_3101 
Symbol 
ID3368622 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp3718736 
End bp3719734 
Gene Length999 bp 
Protein Length332 aa 
Translation table11 
GC content59% 
IMG OID637653446 
ProductAlpha/beta hydrolase fold 
Protein accessionYP_236171 
Protein GI66046330 
COG category[R] General function prediction only 
COG ID[COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)  
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0283201 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGGGCTG CAAAGATTGC CGGCATGTTG ATGTCGTTGA CGCTGTCAGG CGCAGCACTG 
GCTGAGACGC CCGGTTATGG CCAGCAACTG GAAGGTTTCA CGTACCCCCA TGCGCTGCAC
AAATTCAGTT TCCAGTCCCA GGGCCAGACG CTGGAAATGG GTTATATGGA CGTCGCGCCC
AGTGGCAAAG CCAACGGCCG CACGGCGGTG CTGATGCATG GCAAGAATTT TTGCGCTGCG
ACCTGGGAAG ACACCATCAA GGGACTGAGT GCCGCGGGCT ATCGCGTCGT CGCAGCGGAT
CAGATCGGTT TCTGCACCTC GACCAAGCCG GAGCACTACC AGTACAGCTT CCAGCAGTTG
TCGATGAACA CCCACGCGCT GCTGGAAAAA CTGGGCCTCG ACAAGGTGTC GGTGGTCGGT
CACTCCACGG GCGGCATGCT GGCCACGCGT TACGCATTGT TGTACCCGAA GCAGACCGAG
AAGCTGGTGA TGGTCAACCC TATCGGTCTG GAAGACTGGA AAGCACTCGG CGTGCCGTAC
CGCAGCGTCG ACCAGTGGTA TGAGCGAGAG CTGAAGACCA CCGCCGAAGG CATTCGCGCC
TACGAGCAGA AGACTTACTA CGACGGCCGC TGGAAGCCTG AGTATGACAA GTGGGTCGAC
ATGCTGGCCG GTTTGAACAA AGGGCCGGGT CACAAGGTCG TGGCCTGGAA CTCGGCGTTG
ATCTACGACA TGATTTTCAC CCAGCCGGTG TTCTACGAGT TCCCCAGGTT GCAGGTGCCG
ACGGTGCTGA TGATTGGCGA TGCCGATACC ACTGCCATCG GCAGCGACAT CGCCCCGCCT
GAGGTCAAGG CGAAGATCGG CAATTACAAG GTACTGGGCA AGCAGGTGGC GCAGATGATC
CCGGGCGCCA GGCTGGTGGA ATTCAAGGGC AAGGGCCATG CCCCGCAGAT GGAAGACCCG
CAGGGCTTCA ACAAGGCACT GGTCTCCGAA CTTCAATAA
 
Protein sequence
MRAAKIAGML MSLTLSGAAL AETPGYGQQL EGFTYPHALH KFSFQSQGQT LEMGYMDVAP 
SGKANGRTAV LMHGKNFCAA TWEDTIKGLS AAGYRVVAAD QIGFCTSTKP EHYQYSFQQL
SMNTHALLEK LGLDKVSVVG HSTGGMLATR YALLYPKQTE KLVMVNPIGL EDWKALGVPY
RSVDQWYERE LKTTAEGIRA YEQKTYYDGR WKPEYDKWVD MLAGLNKGPG HKVVAWNSAL
IYDMIFTQPV FYEFPRLQVP TVLMIGDADT TAIGSDIAPP EVKAKIGNYK VLGKQVAQMI
PGARLVEFKG KGHAPQMEDP QGFNKALVSE LQ