Gene Psyr_3100 details

Gene Information

• Locus tag: Psyr_3100
• ID: 3368621
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pseudomonas syringae pv. syringae B728a
• Kingdom: Bacteria
• Replicon accession: NC_007005
• Strand: +
• Start bp: 3718281
• End bp: 3718667
• Gene Length: 387 bp
• Protein Length: 128 aa
• Translation table: 11
• GC content: 61%
• IMG OID: 637653445
• Product: nitrite reductase [NAD(P)H], small subunit
• Protein accession: YP_236170
• Protein GI: 66046329
• COG category: [P] Inorganic ion transport and metabolism; [R] General function prediction only
• COG ID: [COG2146] Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases
• TIGRFAM ID: [TIGR02378] nitrite reductase [NAD(P)H], small subunit

Plasmid Coverage information

• Num covering plasmid clones: 17
• Plasmid unclonability p-value: 0.391289
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 14
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGAACGCGT CTCAGACAAT ACGCACCGGC GACAATGCGC CAACGGCAGC GCAGCAGCAC 
TGGCAGACCC TGTGCGGACG TGCGGATCTG GTCGCCAATT CAGGCGTCGT GGCGTGGCTG 
GACGGCGCGC AGGTCGCACT GTTCTACCTG CCCGAAACTG CACAGGGCGA GCAGCTCTTT 
GCCATTGATA ACCGCGATCC CAAATCGGGG GCCAACGTGA TCGGGCGTGG TCTGATCGGG 
CAGATCGCGG GCGAACTGGT CATCGCCTCG CCGTTGTACA AGCAGCACTT TCGCCTGCAC 
GACGGCAGCT GCATCGAATA CCCGGAACAG CGGCTCGACG TCTGGCCGGT AAGGCTCAAA 
GGTGATCAGG TAGAGATTGC CGTTTAA 

 

Protein sequence

MNASQTIRTG DNAPTAAQQH WQTLCGRADL VANSGVVAWL DGAQVALFYL PETAQGEQLF 
AIDNRDPKSG ANVIGRGLIG QIAGELVIAS PLYKQHFRLH DGSCIEYPEQ RLDVWPVRLK 
GDQVEIAV