Gene Psyr_3096 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_3096 
Symbol 
ID3368617 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp3711664 
End bp3712455 
Gene Length792 bp 
Protein Length263 aa 
Translation table11 
GC content66% 
IMG OID637653441 
ProductABC transporter 
Protein accessionYP_236166 
Protein GI66046325 
COG category[H] Coenzyme transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG1120] ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.516576 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGCCT TACCCCATTC GCTCAATGCA CCGGTGCTCG GTTGTGCCGG TCTGGGTTAT 
TCGGTACGTG GCGCAGCGCT GCTGCGCGAT GTCGACCTGA GCATTGCCGC CGGTGAAACC
CTGGCCGTGG TCGGTCCCAA CGGCTCGGGC AAATCCACCC TGCTCAAGCT GTTGGCCGGT
ATTCAGAAGC CGGTCAGCGG CTCGGTCAGC CTGGACGGGC AAGCACTTGA AGCGTTGAGC
CGCAGGGACG TGGCGCGCCT GCTGGCGGTG GTCGAGCAGC AGGCTGAAAC CAGCGACGCC
GTGACCGTGC TGGATGCCGT CGAACTGGGC CGCACGCCCT GGCTGTCGGC GTTGGAGCCG
TGGAGCGCAA CGGACGACGC GATCGTTCGC CAGGCGTTGC AGGATGTGGA CATGCTGCAC
CTGCAAAAAC GCGCCTGGCA CACTTTGTCC GGTGGCGAGC GGCAGCGCGT TCACATCGCC
CGGGCGCTGG CGCAACGGCC GCAGATCCTT CTGCTGGACG AACCGACCAA TCATCTGGAC
ATCCAGCATC AACTGACCAT CCTCGGCCTG GTCAGAGCCT TGCCGGTGAC CACCGTGATT
GCCCTGCACG ACCTGAATCA GGCGCTGGAC TGCGACCGTG TGGCGGTCAT GGAAAAGGGT
CGGCTGGTCG CGCTGGGTGC GCCGCTCGAG GTGCTGACCC CGGAACGCCT GCTGAGCACC
TTCGGCGTGG TGGCGCACTG GCTGACCGAC CCCAGTGACG GGGCGAAGAT TCTGCGCCTG
CGCTCGCGCT GA
 
Protein sequence
MNALPHSLNA PVLGCAGLGY SVRGAALLRD VDLSIAAGET LAVVGPNGSG KSTLLKLLAG 
IQKPVSGSVS LDGQALEALS RRDVARLLAV VEQQAETSDA VTVLDAVELG RTPWLSALEP
WSATDDAIVR QALQDVDMLH LQKRAWHTLS GGERQRVHIA RALAQRPQIL LLDEPTNHLD
IQHQLTILGL VRALPVTTVI ALHDLNQALD CDRVAVMEKG RLVALGAPLE VLTPERLLST
FGVVAHWLTD PSDGAKILRL RSR