Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_3096 |
Symbol | |
ID | 3368617 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | + |
Start bp | 3711664 |
End bp | 3712455 |
Gene Length | 792 bp |
Protein Length | 263 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637653441 |
Product | ABC transporter |
Protein accession | YP_236166 |
Protein GI | 66046325 |
COG category | [H] Coenzyme transport and metabolism [P] Inorganic ion transport and metabolism |
COG ID | [COG1120] ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.516576 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAACGCCT TACCCCATTC GCTCAATGCA CCGGTGCTCG GTTGTGCCGG TCTGGGTTAT TCGGTACGTG GCGCAGCGCT GCTGCGCGAT GTCGACCTGA GCATTGCCGC CGGTGAAACC CTGGCCGTGG TCGGTCCCAA CGGCTCGGGC AAATCCACCC TGCTCAAGCT GTTGGCCGGT ATTCAGAAGC CGGTCAGCGG CTCGGTCAGC CTGGACGGGC AAGCACTTGA AGCGTTGAGC CGCAGGGACG TGGCGCGCCT GCTGGCGGTG GTCGAGCAGC AGGCTGAAAC CAGCGACGCC GTGACCGTGC TGGATGCCGT CGAACTGGGC CGCACGCCCT GGCTGTCGGC GTTGGAGCCG TGGAGCGCAA CGGACGACGC GATCGTTCGC CAGGCGTTGC AGGATGTGGA CATGCTGCAC CTGCAAAAAC GCGCCTGGCA CACTTTGTCC GGTGGCGAGC GGCAGCGCGT TCACATCGCC CGGGCGCTGG CGCAACGGCC GCAGATCCTT CTGCTGGACG AACCGACCAA TCATCTGGAC ATCCAGCATC AACTGACCAT CCTCGGCCTG GTCAGAGCCT TGCCGGTGAC CACCGTGATT GCCCTGCACG ACCTGAATCA GGCGCTGGAC TGCGACCGTG TGGCGGTCAT GGAAAAGGGT CGGCTGGTCG CGCTGGGTGC GCCGCTCGAG GTGCTGACCC CGGAACGCCT GCTGAGCACC TTCGGCGTGG TGGCGCACTG GCTGACCGAC CCCAGTGACG GGGCGAAGAT TCTGCGCCTG CGCTCGCGCT GA
|
Protein sequence | MNALPHSLNA PVLGCAGLGY SVRGAALLRD VDLSIAAGET LAVVGPNGSG KSTLLKLLAG IQKPVSGSVS LDGQALEALS RRDVARLLAV VEQQAETSDA VTVLDAVELG RTPWLSALEP WSATDDAIVR QALQDVDMLH LQKRAWHTLS GGERQRVHIA RALAQRPQIL LLDEPTNHLD IQHQLTILGL VRALPVTTVI ALHDLNQALD CDRVAVMEKG RLVALGAPLE VLTPERLLST FGVVAHWLTD PSDGAKILRL RSR
|
| |