Gene Psyr_3094 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_3094 
Symbol 
ID3368615 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp3709635 
End bp3710648 
Gene Length1014 bp 
Protein Length337 aa 
Translation table11 
GC content62% 
IMG OID637653439 
Productperiplasmic binding protein 
Protein accessionYP_236164 
Protein GI66046323 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0614] ABC-type Fe3+-hydroxamate transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0239264 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.801568 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGCTGC CCCGCCTCGC CGCACTCGCT GCCAGCCTGA CGCTGTCCAC CCTGGCCCTC 
GCCGCCCCCA CTCAGTACCC GCTGACCCTT GAAAACTGTG GCGCGACCCT GACCTTCACG
CATGCGCCAA CCAAGGCTGT GACCATTGGC CAGGCCGGCA CCGAAATGCT TTACGAACTG
GGCCTGGGCG ACAGACTGGT CGGCACTTCG CTGTGGTTCA ACAACGTATT GCCACGCTTC
AAGGCGCAGA ACGACAAGGT CGAACGCCTG GCCGACAACG AGCCCAGTTT CGAGGCAGTG
ATCGGCAAGC GTCCGGAACT GGTGGCCGTG CAGCTGGAGT GGATGGTCGG CAAACAGGGC
GTGGTCGGCA CCCGCGAGCA GTTCCATGAC CTGAAGATAC CCACTTACAT CCTGCCGTCC
GACTGCGAAG GCAAGGACAA TCTGGTCGGT GCCGATGGCA CACGTCTGGA GCCATTCCGC
ATCGAGACCA TCTACAAGAG CATCGGGCAA CTGGCGAAGA TCTTCGATGT GCAGGATCGC
GGCGACGCGC TGGTTACTGA CCTCAAGGCC CGCCTGAGCG CGGCGATTGC CAACGTCAGG
CAGAACAAGG CCAACGACGT CTCGGCGCTG TTCTGGTTCT CCAGCTCCGA CCTTGCCAGC
GACCCTTTCG TGGCAGGCCG CAAAGGTATT CCGGACTTCA TGCTCAACAG CCTGGGCATG
CGCAATATCG TTCAGTCCGA CGAAGAGTGG CCAACCGTGG GCTGGGAAAC CATCGCCAAG
GCCAACCCGA GCATTCTGGT CATCGCGCGC ATGGATCGCC GCCGTTTCCC GGCCGACGAT
TACCTGAAAA AAATCGAATT CCTCAAGACC GACCCGGTGA CCCGCAACAT GGACGCGGTC
AAGCATGACC GGATCGTGAT CATCGACGCC GAGGGCATGC AGGCTGGCCT GCGTCTGTTC
ACCGGGTTCG AGGAACTGGC TGACGCCGCC AACCGTTTCA ACGCTGCCAA ATGA
 
Protein sequence
MSLPRLAALA ASLTLSTLAL AAPTQYPLTL ENCGATLTFT HAPTKAVTIG QAGTEMLYEL 
GLGDRLVGTS LWFNNVLPRF KAQNDKVERL ADNEPSFEAV IGKRPELVAV QLEWMVGKQG
VVGTREQFHD LKIPTYILPS DCEGKDNLVG ADGTRLEPFR IETIYKSIGQ LAKIFDVQDR
GDALVTDLKA RLSAAIANVR QNKANDVSAL FWFSSSDLAS DPFVAGRKGI PDFMLNSLGM
RNIVQSDEEW PTVGWETIAK ANPSILVIAR MDRRRFPADD YLKKIEFLKT DPVTRNMDAV
KHDRIVIIDA EGMQAGLRLF TGFEELADAA NRFNAAK