Gene Psyr_3093 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_3093 
Symbol 
ID3368614 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp3708294 
End bp3708989 
Gene Length696 bp 
Protein Length231 aa 
Translation table11 
GC content61% 
IMG OID637653438 
Producthypothetical protein 
Protein accessionYP_236163 
Protein GI66046322 
COG category[T] Signal transduction mechanisms 
COG ID[COG2062] Phosphohistidine phosphatase SixA 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.582297 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.758482 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGACCGACA CGATAATCAA CAAGAATGTA CTGCCACGTT CGGGCATCAG TCAGCGCTAC 
AAATTGCATC GGCACATCGT ATCGATGTCT GTTGCCGTCG TGCTGACGGC TATCTGCGCG
TGGTTCTACT CGGCCTTCTC GGGCGTGCAC GTGGTGGACC TGGGGGTGGG CAGCAACCTG
AGCGTTTCCG GCCTCCGCGA GCACTGGCGA CAAGGCGATG TGGTGGTGAT GATTCGCCAT
GCCGAACGCT GTGACCGCTC GAACAACCCG TGCATGAGCG ACGCCGACGG CATTACCTCC
AACGGCCGCG ACGCCGCTCT GGCGGTGGGC GCCGGGTTGC AGAAAATGGG CATGGACCAC
GCGCGCCTGA TCGCCAGCCC CAAGACCCGC ACGCAACAGA CTGCGCAACT GTTGGCCGGG
CACGCGGTGG CTGGCCAAGA CTGGATCAAC GACTGTGACA GCGGCTTCAT GAAGGCTGTG
CAGGCTCACA AGGTCAGCGG CGAGAACATG GTGCTGGTGA CCCACAGTGG CTGCATCGAC
CAGTTCGAAC GCAAGGCCGG CGTACCTGGC GGCGAGCGCT CGAGTGAGTA CGCCCAGGCG
TTTTTCGTAC AAATAGACGG CAGCCATCCG CCGAAAATCC TCGGCTCCCT GAATGCCGGG
CAATGGGCAA ACCTCAACAG CGAGCAATTC AATTGA
 
Protein sequence
MTDTIINKNV LPRSGISQRY KLHRHIVSMS VAVVLTAICA WFYSAFSGVH VVDLGVGSNL 
SVSGLREHWR QGDVVVMIRH AERCDRSNNP CMSDADGITS NGRDAALAVG AGLQKMGMDH
ARLIASPKTR TQQTAQLLAG HAVAGQDWIN DCDSGFMKAV QAHKVSGENM VLVTHSGCID
QFERKAGVPG GERSSEYAQA FFVQIDGSHP PKILGSLNAG QWANLNSEQF N