| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_3073 |
|---|
| Symbol | |
|---|
| ID | 3368593 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas syringae pv. syringae B728a |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007005 |
|---|
| Strand | - |
|---|
| Start bp | 3672773 |
|---|
| End bp | 3673684 |
|---|
| Gene Length | 912 bp |
|---|
| Protein Length | 303 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 637653419 |
|---|
| Product | regulatory protein, LysR:LysR, substrate-binding |
|---|
| Protein accession | YP_236145 |
|---|
| Protein GI | 66046304 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.857861 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACAATGA CTCCAGTGGA TGGATCGGCT ACCTTCGAGG TTAATAACCT GTTCAGAAAC
CCCAGGATCT GTTTTGACTG GGAGGACCTG CGTTACTTCG TGATGTTTTC CACGGTCAGC
TCCCTGAGTG GCGCTGCAAG GATGCTGGGT GTGGAGCACG CCACTGTGTC ACGCCGTATC
GCTTCGCTGG AGAAGTCTCT GAATGTAAAG CTTGTCGATC GTCGCAAGCG GTTGTACGAA
CTGACGGATG AGGGACGGCG TGTGGCGGCG ATCGGGCGAC AGATCGAGGC GCAGACTCAG
GCTGTTGGCC GTCTCGCGGT TGCGGCTCAG GTGGTGCAGG GTGTGGAGGT GACCATCAGT
GCGCCGCCGT CGGTGGCGGT CGAGAAGTTG GTGCCGCAAT TGGGGGCGTT TCGGGCGATG
CATCCCGGTA TTGTGTTGCG GTTGTTGGGC GATCATCAGT ATTCGTCGTT ATCCAGCTGC
CAGTCTGACC TGTGTATACG GTTTTCCAGA CCTGTTGAAA GCGGTATCGT CGCGCGGCGG
ATTGGCACGG CTTCCTTTTC ATTTTATTGC GCACGTTTTT ATCTGGAGCA ACGCCCTCCG
GAGCATTACG AGTTTATTGC TTATGACAAT GAACTGATGA GTGACAGTCA GAACGGTTGG
TTGAGGGATA TCGTCGGTGA TCGACCCTTT GTGCTGGAGG CCAAAACGGT GGAGTTGCAA
ATTCGTGCTG CGGAAACCGG TGTGGGCATC GCGTTACTGC CCAGTTTTGC CGTAGAGGAT
AATAATCGTC TGTGCCGGGT GGAGTTGTCT GCTCCGCTGG AAGTCGATGT CTGGCTGGGC
GTGCATGAAG ACCTGCGCGC GGTGGCTTCC ATCCAGGCTG CCATGAACTA TGTGGAAAGC
TGTTATCGCT AG
|
|---|
| Protein sequence | MTMTPVDGSA TFEVNNLFRN PRICFDWEDL RYFVMFSTVS SLSGAARMLG VEHATVSRRI
ASLEKSLNVK LVDRRKRLYE LTDEGRRVAA IGRQIEAQTQ AVGRLAVAAQ VVQGVEVTIS
APPSVAVEKL VPQLGAFRAM HPGIVLRLLG DHQYSSLSSC QSDLCIRFSR PVESGIVARR
IGTASFSFYC ARFYLEQRPP EHYEFIAYDN ELMSDSQNGW LRDIVGDRPF VLEAKTVELQ
IRAAETGVGI ALLPSFAVED NNRLCRVELS APLEVDVWLG VHEDLRAVAS IQAAMNYVES
CYR
|
|---|
| |