| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_3059 |
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| Symbol | |
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| ID | 3368579 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. syringae B728a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007005 |
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| Strand | - |
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| Start bp | 3657318 |
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| End bp | 3658925 |
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| Gene Length | 1608 bp |
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| Protein Length | 535 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 637653405 |
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| Product | hemolysin-type calcium-binding region:peptidase M10A and M12B, matrixin and adamalysin |
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| Protein accession | YP_236131 |
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| Protein GI | 66046290 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG2931] RTX toxins and related Ca2+-binding proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.196168 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCGGCC CAAATGAATC AAGTCCTGCC GAACTTCTGC CCGAGGGAGC TCCCGACGAC
CGAGTCACCA GCCTGTTATG GGGGCCATTC TGGCTTGGGG ATTCGTCCGG CACCCATCTG
ACTTACAGTT TTCATAAGGC CGACTCTGTC TACGCCACTG ATTACAGTCG CTCTCAAGAG
CCCGGCGATG CCTATTCGCT GACCGACGCC CAGGCGGCAG CCGCAAAAAG CGCACTGGAT
GCCTGGAGTG CGGTGGCAGA TATCAAGTTC ACCGAGGTTC AGGACACCCC CGATAATGTC
GGAGACATCC GTTTCGGTGG CTTCAAGGGA CTGCAAGGCA CCGAGTTTGG CCAGGCTTAT
GCGCCGGGTA CGCTGGGTCG CTCCGGCGAT GTCTGGATCG GGCCGAACGT CAACGCGGCC
GATCCTGCCA AGGGCACGGA TGATTACCTC ACGTTCATGC ATGAAACCGG TCATGCACTG
GGCTTGAAGC ATTCGTTCGA AGCCTCGCAG TACAACGATG TTCTGCTGGA TGCCAAATTC
GAAGATGCGC GTTACACCAT CATGAGCTAC ACCAACAATT ACAGCTTCAA GCCCACCACG
CCGATGTTGC TCGATATCGC GGCCATGCAG TTTATATACG GTGCCAACAC CCACTATCAT
ACCGGCGACG ACGTCTATAA ATGGGCACCT GGGCAGTCGG TATTCGAGAC CATCTGGGAC
GCTGGCGGCA AAGACACCAT TGATGCCAGC AATCAGGAAG CATCGGTGAA AATCAACCTC
AACGAGGGTG AGTTCAGCAC CATCGGCAAG GCGTTTCTCG ATTACAACGC GAACCCTGAT
GCACCGACGT CGATGAATTC CGGTCTGGCG ATCGCCTACG GGGCGCACAT CGAAAACGCC
ATAGGTTCCG CTTTCAATGA CACGCTGATC GGCAACGAAC TGGATAACGT GCTCAATGGC
CGCGGCGGTC TGGATACCAT GGTCGGCGGG CTGGGCAACG ATACCTACGT CATCGATCAG
GCAGGCGAAC TGGACCTGGT TCAGGAAAAG GCCGATCAGG GCATCGATAC GCTGAAGATC
ACCTACGACA ATACCTCGCC CATTGCCCAG GTCATCAACC TCAATGCCGG GACGTTGGCG
AACTTCGAGA ATGTCCACCT CAAAGGTGAG GGTGCGTTCA CCGTGCTGGG CAATGATCGC
AACAACACCC TGACCGGCAA TGACGCGGAC AACGTTCTTT TCGGCGGCGC CGGCAATGAC
AAACTGGTAG GCGGTCAGGG CGCCGATATC ATGACTGGCG GTAGCGGCGC TGACCGTTTC
GTGTTCAACA ACCTGTCGGA AATGGGCAAA GGCCACAACA GCGACGTGAT TACCGACTTC
AATAGCCAGC AAGGCGACAA ACTGAGCTTC TTGAAGATGG ATGCCAACGT GGACACCAAA
GCCCTCGATG CTTTCAGCTT CATCGGTAGC GGCGAGTTCA CCGGCGCTGG CCAGCTGCGT
TTCGCTGACC ATGTGCTGTC CGGTAACGTC AACGGCGACC TGCATGCGGA CTTTGAAATC
CAGCTGGTCG GCGTCAGCGA GTTCCATGCC CATGATCTGG CGGTCTGA
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| Protein sequence | MPGPNESSPA ELLPEGAPDD RVTSLLWGPF WLGDSSGTHL TYSFHKADSV YATDYSRSQE
PGDAYSLTDA QAAAAKSALD AWSAVADIKF TEVQDTPDNV GDIRFGGFKG LQGTEFGQAY
APGTLGRSGD VWIGPNVNAA DPAKGTDDYL TFMHETGHAL GLKHSFEASQ YNDVLLDAKF
EDARYTIMSY TNNYSFKPTT PMLLDIAAMQ FIYGANTHYH TGDDVYKWAP GQSVFETIWD
AGGKDTIDAS NQEASVKINL NEGEFSTIGK AFLDYNANPD APTSMNSGLA IAYGAHIENA
IGSAFNDTLI GNELDNVLNG RGGLDTMVGG LGNDTYVIDQ AGELDLVQEK ADQGIDTLKI
TYDNTSPIAQ VINLNAGTLA NFENVHLKGE GAFTVLGNDR NNTLTGNDAD NVLFGGAGND
KLVGGQGADI MTGGSGADRF VFNNLSEMGK GHNSDVITDF NSQQGDKLSF LKMDANVDTK
ALDAFSFIGS GEFTGAGQLR FADHVLSGNV NGDLHADFEI QLVGVSEFHA HDLAV
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