Gene Psyr_3050 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_3050 
Symbol 
ID3368570 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp3647777 
End bp3648640 
Gene Length864 bp 
Protein Length287 aa 
Translation table11 
GC content60% 
IMG OID637653396 
Productputative oxidoreductase 
Protein accessionYP_236122 
Protein GI66046281 
COG category[C] Energy production and conversion 
COG ID[COG0667] Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.378412 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0203224 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATCATG CAAACAAGGC AGGTACGTTC CTGTTGGGCA GCCATCGCGT CAACCGCATG 
GGCTATGGCG CGATGCAACT GGCCGGGCCT GGCGTGTTCG GTCCTGCAAA AGATCCGCAG
GGCGCCATCG CGGTATTGCG CGAAGCCCTC GCCCTGGGGG TAAACCATAT CGATACCGCA
GACTTTTACG GCCCGCATGT CACCAATACG CTGATTCGCG AAGCGCTGCA CCCTTACGCG
GATGACTTGC TGATCGTCAC CAAGGTCGGC GCAGTGCGTG GCGCGGATGC TTCATGGAAT
CCTGCATCCA GCCCGGCGCA ATTGACCGCG GCGGTCCACG ACAACCTGAA GAACCTCGGG
CTGGAGGTGC TCGATGTGGT CAACTTCCGG GCATGGGGCG AGCAGCATTC ACCCGCAGAA
GGCTCGATCG AGGAACCGTT GACGGTGCTG GCCGAGTTGC AGCGCCAGGG TCTGATCCGT
CATCTCGGGG TCAGTAACGT CACTGCCCGG CAAGTCAGGC AGGCGCAGGG GATTGCCGAG
ATTGTCTGCG TGCAGAATCA CTACAACCTT TCGCATCGCC ATGACGAGCC GCTGATTGCA
GAACTGGGCG AGCAGGGCAT TGCGTATGTC CCGTTCTTCC CGATGGGCGG ATTTTCACCC
CTGCAATCGG AAACCCTGAG CCGAGTAGCC GCTGGGCTGA ATGCCTCGCC GTCGTGTGTC
GCTCTGGCCT GGTTGCTGCA ACGTGCGCCC AATATTCTGC TGATTCCGGG CACCTCATCC
ATCGCTCATT TGCGCGAAAA CCTTGCCGCC AGCGAGCTGG TGATTGCGCC GCAATTGCTC
GCCGAACTCG ATAGTGTTGC TTAG
 
Protein sequence
MNHANKAGTF LLGSHRVNRM GYGAMQLAGP GVFGPAKDPQ GAIAVLREAL ALGVNHIDTA 
DFYGPHVTNT LIREALHPYA DDLLIVTKVG AVRGADASWN PASSPAQLTA AVHDNLKNLG
LEVLDVVNFR AWGEQHSPAE GSIEEPLTVL AELQRQGLIR HLGVSNVTAR QVRQAQGIAE
IVCVQNHYNL SHRHDEPLIA ELGEQGIAYV PFFPMGGFSP LQSETLSRVA AGLNASPSCV
ALAWLLQRAP NILLIPGTSS IAHLRENLAA SELVIAPQLL AELDSVA