Gene Psyr_3043 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_3043 
Symbol 
ID3368563 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp3641543 
End bp3642181 
Gene Length639 bp 
Protein Length212 aa 
Translation table11 
GC content58% 
IMG OID637653389 
Productparaquat-inducible protein A 
Protein accessionYP_236115 
Protein GI66046274 
COG category[S] Function unknown 
COG ID[COG2995] Uncharacterized paraquat-inducible protein A 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.121021 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGTCGA TGAGCACTGT GCATCCTATC GAACACTCTT CCGGCCTGAT CATCTGCGAG 
CACTGTGACT CGCTCTACGA AGCCCATCCC CTGCAGCCCG GCGAGGCGGC ATTCTGCCTT
CGCTGCGAAG CACTGCTCGG TCGTGGCCAT CGGGTGACCA TAGAGCAGCT GCTCGCGTTG
ACCATCGCTG CAGCCATGCT TTTCATCTTC GCCAATCTGT TTCCGGTCAT CAGCATCAAT
ATGAAAGGCC TGTCCAACGA GGTCACACTC TGGCAATCGG TTGAAGCGCT TGCTCAAGGG
CGGATCACGA TCATTGCCCT GGTGGCCGGC CTGTCGATCA TTTTTGCCCC TCTGTTGCAG
ATCGTTCTGC TGTTCTGGGT GCTGGTACAT GCGCACAAGG GCATTATCGC GCCCGGCTTC
AGAACCTGCA TGCGTGCGCT GGAGCACTTG CGTCCATGGA GCATGCTCGA GGTGTGCATG
CTCGGTATTC TGGTGGCCAT CATCAAACTG TCCGGGATGC TCGATGTACA CCCCGGTGTC
GGTCTCTGGG CCATGGCCAT GCTGATGGTG CTGATCCTGC TGATCGCCAA CAAGGATATC
CGCCGATTGT GGGATGAACT GGGAGTGCAG CCGCAATGA
 
Protein sequence
MASMSTVHPI EHSSGLIICE HCDSLYEAHP LQPGEAAFCL RCEALLGRGH RVTIEQLLAL 
TIAAAMLFIF ANLFPVISIN MKGLSNEVTL WQSVEALAQG RITIIALVAG LSIIFAPLLQ
IVLLFWVLVH AHKGIIAPGF RTCMRALEHL RPWSMLEVCM LGILVAIIKL SGMLDVHPGV
GLWAMAMLMV LILLIANKDI RRLWDELGVQ PQ