Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_3036 |
Symbol | |
ID | 3368556 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | - |
Start bp | 3636310 |
End bp | 3636960 |
Gene Length | 651 bp |
Protein Length | 216 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 637653382 |
Product | regulatory protein, TetR |
Protein accession | YP_236108 |
Protein GI | 66046267 |
COG category | [K] Transcription |
COG ID | [COG1309] Transcriptional regulator |
TIGRFAM ID | |
| 

|
Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0300267 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.0658454 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGTCATCG AAGAATCAGG GAATGAATCC GCAGAAACGG CCCCACCCAA GCGTCGCCGC GCGCCCAAGG GAGACATGCG CAGAAAGGCC TTGCTGGATG CCGCTACCGT CGTTTTTGCC AGAGACGGCT ATTCGAGTGC GTCGATGCGC GAGGTTGCAC TGCTTGCCGG TATCACTACG GTAGGGTTGC TGCACCATTT TCCCAACAAG GAAGCCTTGC TCGCCGCCTT GCTGGAGCGC AGGGACCAGC GGGTCACCTC GCGTTTTCAG GATCTGGTCA CCGAGCCGAC GCTTGAAGGG TTTCTGAAGT TTCTCAAGCT GAGCATGAGT TTCAGTATCG AGAATGCCGA GGAGTGTCAG GCAGCGCTGC TGATGAATAC CGAGAGCCTG TCGAAGGCGC ACCCGGCATG GGCCTGGCAC CTTGAGCGAT TCCAGCTGAC CCACGAACAC GCACGCAGCC ATTTGCAGGC GTTGATAGAA GCGGGGGAAG TGCGCGGCGA TATCAATGTC AAAGCCCTGG CCCAGGAGAT CTTCTCGGTC ATGGACGGCT TGCAGATTCA GTGGCTGCGA AGCCCCCGCG ACGTGGATGT CATGGCGGTT TTCGATATCT ACGTGCAGCG ATTGGGAAGG GATATCAAGG CTCATCCATG A
|
Protein sequence | MVIEESGNES AETAPPKRRR APKGDMRRKA LLDAATVVFA RDGYSSASMR EVALLAGITT VGLLHHFPNK EALLAALLER RDQRVTSRFQ DLVTEPTLEG FLKFLKLSMS FSIENAEECQ AALLMNTESL SKAHPAWAWH LERFQLTHEH ARSHLQALIE AGEVRGDINV KALAQEIFSV MDGLQIQWLR SPRDVDVMAV FDIYVQRLGR DIKAHP
|
| |