| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_3033 |
|---|
| Symbol | |
|---|
| ID | 3368553 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas syringae pv. syringae B728a |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007005 |
|---|
| Strand | + |
|---|
| Start bp | 3631486 |
|---|
| End bp | 3632364 |
|---|
| Gene Length | 879 bp |
|---|
| Protein Length | 292 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 637653379 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_236105 |
|---|
| Protein GI | 66046264 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.0401759 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCCCGC AGAACCCGTC AGCACGTTTT TTCCCGACCT TTCTGGCCCT TGTGGCGCTG
ATGCTCAGCC TGTGCGTAGC ACCGGCATGG GCTGCAGAAA AAAGCGCCAA GCGCGGCATC
GCCTACGACA TCGCCCTGCC CGCCGACCTG AGTGCGTTAT CTGCAGGCGT GAGCTGGTGG
TACAACTGGA GCCCCAGGCC CCACGACCGC CTGGCGTCGT ACGACTACGC CTCGATGTAC
GGCGTGGATT TCATTCCGAT GGTATGGAAC GGCAACGTTG ACGACGGGCA GTTGAAGCAA
TACCTGCTGG CTCACTCAGC CATCCGCTAT CTGCTGGTGA TCAATGAGCC GAATCTGCTC
GATCAGGCCA ACATGACGCC CGAAGCGGCG GCCGGCTTCT GGCCGAGACT GGAACAGATC
GCCGCCCAGA CCGGCGTAAA ACTGGTGGGG CCAGCGATGA ACTGGGGAAC CATGCCGGGC
TACGGTGACC CGGTCGTGTG GCTCGATGCC TTCTACACAG CCTATCGGTC GATGAATCAG
AATCGCGACC CGCGCATCGA TTACCTGGCT TTTCACTGGT ACGACTATGG CTTGCCAGGG
ATGCTCGACC GGCTGTCGAA GTACGGAAAA CCCTTCTGGG TCACCGAGTT CGCCAATTGG
CACGCTCCGG ATGACGGAGC GCAGATTGAT TCGGTCGACA AGCAGAAGCG GCAGATGGCG
GAAATGGTCG CCACCCTTGA GCAGCGCCAG GACGTGTTCA GATACGCCTG GTTCACCGGC
CGGATGAACC CTGACCCGCA CTTTTCAAGT TTGCTGGACG CTGAGGGCAA GCTGACTGAG
ATGGGCCAGT ATTACCTGTC GCTGCCACAC AGCGAGTAA
|
|---|
| Protein sequence | MTPQNPSARF FPTFLALVAL MLSLCVAPAW AAEKSAKRGI AYDIALPADL SALSAGVSWW
YNWSPRPHDR LASYDYASMY GVDFIPMVWN GNVDDGQLKQ YLLAHSAIRY LLVINEPNLL
DQANMTPEAA AGFWPRLEQI AAQTGVKLVG PAMNWGTMPG YGDPVVWLDA FYTAYRSMNQ
NRDPRIDYLA FHWYDYGLPG MLDRLSKYGK PFWVTEFANW HAPDDGAQID SVDKQKRQMA
EMVATLEQRQ DVFRYAWFTG RMNPDPHFSS LLDAEGKLTE MGQYYLSLPH SE
|
|---|
| |