Gene Psyr_3030 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_3030 
Symbol 
ID3368550 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp3628614 
End bp3629387 
Gene Length774 bp 
Protein Length257 aa 
Translation table11 
GC content61% 
IMG OID637653376 
Productenoyl-CoA hydratase/isomerase 
Protein accessionYP_236102 
Protein GI66046261 
COG category[I] Lipid transport and metabolism 
COG ID[COG1024] Enoyl-CoA hydratase/carnithine racemase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.045049 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTTTACG AGACTATTCT CATTGAGATT ATAGGTAGTG TGGGCCTGAT CAGGCTTAAC 
CGGCCTAACG CGTTGAACGC CTTGAATGCG CGTCTGATCA ACGAATTGAA CCATGCGCTC
GATCAGTTCG AGGCGGACAG TGCGATCGGC TGCATCGTGC TGACCGGCTC GGAAAAAGCC
TTCGCCGCCG GTGCGGACAT CAAGGAAATG GTCGACCTGT CCTACCCGCA GATCTACCTC
GATGACCTGT TTCGTGACAG CGACCGGGTT GCGGCCCGAC GCAAACCCCT GGTGGCTGCG
GTGGCCGGTT TTGCCTTGGG TGGCGGCTGT GAACTGGCAT TGATGTGCGA TTTCATTCTG
GCTGCCGAGA ACGCCAGGTT TGGACAGCCC GAGATCAATC TCGGCGTGTT GCCGGGGATG
GGCGGAACGC AGCGTCTGAC CCGCGCGGTG GGCAAGGCCA AGGCCATGGA GATGTGCCTG
ACCGGCCGGT TGATCGATGC TCACGAGGCC GAGCGCGCCG GTCTGGTGGC CCGCGTGCTG
CCGCTCGATC AGTTGCTGCC GGAAGCGCTT GCAGTGGCAG CGGTCATCGC CAGTAAATCC
CTGCCAGTAG CGATGATGGT CAAAGAGAGC GTCAACCGCG CGTTCGAGGT CAGCCTGGCC
GAAGGCATCC GCTTCGAGCG CCGGGTTTTT CACGCCGCCT TCGCCAGCCA GGATCAGAAG
GAGGGCATGC GCGCCTTCAT CGACAAGCGC CAGCCCGATT TCAAGGACTG CTGA
 
Protein sequence
MLYETILIEI IGSVGLIRLN RPNALNALNA RLINELNHAL DQFEADSAIG CIVLTGSEKA 
FAAGADIKEM VDLSYPQIYL DDLFRDSDRV AARRKPLVAA VAGFALGGGC ELALMCDFIL
AAENARFGQP EINLGVLPGM GGTQRLTRAV GKAKAMEMCL TGRLIDAHEA ERAGLVARVL
PLDQLLPEAL AVAAVIASKS LPVAMMVKES VNRAFEVSLA EGIRFERRVF HAAFASQDQK
EGMRAFIDKR QPDFKDC