Gene Psyr_3020 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_3020 
Symbol 
ID3368540 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp3615461 
End bp3616210 
Gene Length750 bp 
Protein Length249 aa 
Translation table11 
GC content63% 
IMG OID637653366 
Productprecorrin-4 C11-methyltransferase 
Protein accessionYP_236092 
Protein GI66046251 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2875] Precorrin-4 methylase 
TIGRFAM ID[TIGR01465] precorrin-4 C11-methyltransferase 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.157987 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGACTGTCT ATTTCATCGG CGCAGGCCCT GGCGATCCCG AGCTGATCAC CGTCAAGGGC 
CAACGCCTGA TTCGCAGCTG CCCGGTCATT ATCTACGCAG GCTCGCTGGT GCCCCTCGCC
GTTCTGGAGG GCCATCAGGC CGTGCAGGTG ACCAACAGCG CCGAGCTGCA CCTGGAGCAG
ATCATCGATC TGATCAAGCG CGCGCACGCA CAAGGCCAGG ATGTGGCACG CGTGCACTCC
GGGGACCCAA GCCTGTATGG CGCTATCGGC GAGCAGATCC GCCATCTGCG CGAACTGAAC
ATTCCGTTCG AAATCATTCC GGGGGTCACC GCGACCGCTG CCTGCGCTGC GCTGCTGGGC
GTCGAGCTGA CCCTGCCGGA CGTTTCGCAG AGCGTGATTC TGACCCGCTA TGCCGACAAG
ACCTCAATGC CCAGCGGCGA GGAACTGGCC AGCCTGGCCA GCCATCGGGC AACCATGGCG
ATTCATCTGG GAGTGAACAA CCTGCAGCGG ATCGTCGAGG AGCTCATGCC ACATTACGGC
GCCGATTGCC CGATTGCAGT GGTGCACCGC GCCAGCTGGC CGGACCAGGA CTGGGCCGTT
GGCACGCTGG CGGATATTGA GGAAAAGGTA CAGGCCAAGG GCTTTCGCCG TACCGCACTG
ATTCTGGTCG GACGTGTGCT TGCCGATGAC ACCTTCAGCG AGTCCTCGCT GTACCGCGCC
GGGCATGCCC ACTTGTTCAG GCCGGTGTAG
 
Protein sequence
MTVYFIGAGP GDPELITVKG QRLIRSCPVI IYAGSLVPLA VLEGHQAVQV TNSAELHLEQ 
IIDLIKRAHA QGQDVARVHS GDPSLYGAIG EQIRHLRELN IPFEIIPGVT ATAACAALLG
VELTLPDVSQ SVILTRYADK TSMPSGEELA SLASHRATMA IHLGVNNLQR IVEELMPHYG
ADCPIAVVHR ASWPDQDWAV GTLADIEEKV QAKGFRRTAL ILVGRVLADD TFSESSLYRA
GHAHLFRPV