Gene Psyr_3016 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_3016 
Symbol 
ID3368536 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp3612306 
End bp3613370 
Gene Length1065 bp 
Protein Length354 aa 
Translation table11 
GC content62% 
IMG OID637653362 
Productcobalamin synthesis protein/P47K:cobalamin synthesis protein/P47K 
Protein accessionYP_236088 
Protein GI66046247 
COG category[R] General function prediction only 
COG ID[COG0523] Putative GTPases (G3E family) 
TIGRFAM ID[TIGR02475] cobalamin biosynthesis protein CobW 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0521997 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.178415 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAACAC TGGCCAAGCT TCCCGTCACC ATCGTCACCG GCTTCCTCGG CTCGGGCAAG 
ACCACCCTGT TGCGGCACAT GCTCGACAAC GCCGAAGGGC GGCGCATTGC GGTCATCGTC
AATGAGTTCG GCGAGCTGGG CATCGACGGA GAAATCCTCA AGCAGTGCAC GATCGGCTGC
ACCGAAGAAG AAGCCAACGG CCGGGTGTAC GAACTGGCCA ATGGCTGCCT GTGCTGCACC
GTGCAGGAAG AGTTCTTCCC GGTGATGCGC GAACTGGTCG CGCGCCGTGG TGACCTGGAC
CATATCCTGA TCGAAACCTC GGGGCTGGCG CTGCCCAAGC CGCTGGTCCA GGCTTTTCAG
TGGCCGGAAA TCCGCAACGC CTGCACGGTC GATGCGGTGA TCACGGTGGT CGACAGCCCG
GCGGTACTGG CCGGTACCTT CGCTGCCTTC CCGGATCAGG TCGATGCGCA GCGCAAACTC
GATCCCAACC TGGACCACGA GTCGCCCCTG CACGAACTGT TTGCCGATCA ACTGGCCAGC
GCCGATCTGG TGATCCTCAA CAAGGCCGAC ATGATCGACG CCGAAGGTCT GGCGACGGTG
CGTGCCGAAG TTGCCGAGGA GCTGCCGCCT GCGGTCAAGG TGATCGAAGC CAGCAGCGGT
CGCCTGCCGA TCAGCGTGCT GCTGGGTGTT GGTGCCGAGT CCGAGCTGCA CATCGACGCT
CGCAAGACCC ACCATGATCA CCACGACGAT GACGATCATG ATGACCACGA TCACGACGCG
TTCGATTCGA TTTCCCTGAA GCTGCCGCAA GCCGATGAAA AAGTCCTGCT CGATGCACTG
AATCAACTGG TGGTGCAACA CGGCATTCTG CGTGTGAAGG GCTTCGCGGC CATTCCCGGC
AAGCCGATGC GCCTGCTGAT TCAAGGTGTC GGCACGCGTT TCGACAAGCA CTTCGACCGC
GCCTGGCGTG CCGATGAAGA GCGTGCCACG CACCTGGTGC TGATTGGTCA GGAGCTGGAT
GCCGCAGCCC TGCAAGCGCA ACTCAATGCT GCGATTGCCG GCTGA
 
Protein sequence
MKTLAKLPVT IVTGFLGSGK TTLLRHMLDN AEGRRIAVIV NEFGELGIDG EILKQCTIGC 
TEEEANGRVY ELANGCLCCT VQEEFFPVMR ELVARRGDLD HILIETSGLA LPKPLVQAFQ
WPEIRNACTV DAVITVVDSP AVLAGTFAAF PDQVDAQRKL DPNLDHESPL HELFADQLAS
ADLVILNKAD MIDAEGLATV RAEVAEELPP AVKVIEASSG RLPISVLLGV GAESELHIDA
RKTHHDHHDD DDHDDHDHDA FDSISLKLPQ ADEKVLLDAL NQLVVQHGIL RVKGFAAIPG
KPMRLLIQGV GTRFDKHFDR AWRADEERAT HLVLIGQELD AAALQAQLNA AIAG