| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_2985 |
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| Symbol | |
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| ID | 3368505 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. syringae B728a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007005 |
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| Strand | + |
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| Start bp | 3576049 |
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| End bp | 3576735 |
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| Gene Length | 687 bp |
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| Protein Length | 228 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637653331 |
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| Product | 2OG-Fe(II) oxygenase family protein |
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| Protein accession | YP_236057 |
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| Protein GI | 66046216 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG3145] Alkylated DNA repair protein |
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| TIGRFAM ID | [TIGR00568] DNA alkylation damage repair protein AlkB |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.477312 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCAACGCA AAGGTGACAC TCCCGCCACT CTGGACCTGT TCGCGGACCA GACGGCCCAG
CCTCGCAGCG ATGAGCGGAT CGGGCCCGGG TCATGGCTGT TCAGAGGCTT TGCACTGCCG
GCCATGCCGC AGCTGCTGCC TGCGCTTGAA GAGACACTGG GCCTCTCCCC GTTCCGGCAC
ATGCAGACCC CCAGCGGTCT GAGCATGTCT GCAGCACTGA GCAGTTGCGG ACAACTGGGC
TGGATAACCG ACCGCCACGG TTACCGGTAC AGCGCGACCG ACCCACAAAC AGGACAGGCC
TGGCCGACGA TGCCGGACGT ATTCATGCAG CTGGCGCAGG ATGCCGCACT GGCAGCCGGC
TATGCCGGGT TCGTGCCTGA TGCCTGCCTG ATCAATCGCT ATATTCCGGG CGCCAAGATG
TCCCTGCATC AGGACCGAGA CGAATACGAC CATCGCTGGC CAGTGGTCTC CGTATCACTG
GGCATACCGG CCATCTTTCA GTTCGGCGGC CTGCTGCGCG GCGACAAGAC TCAACGCATC
TCCCTGTTTC ATGGCGACGT GGTGGTCTGG GGTGGCGAGG ACAGATTGCG TTTCCACGGC
ATTTTGCCCA TCAAGCAGGC CGAGCATCCG CAGTTGGGTG AGCAACGGAT CAACCTGACC
TTCCGCAAGG CTGGCCGCGA CAGCTGA
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| Protein sequence | MQRKGDTPAT LDLFADQTAQ PRSDERIGPG SWLFRGFALP AMPQLLPALE ETLGLSPFRH
MQTPSGLSMS AALSSCGQLG WITDRHGYRY SATDPQTGQA WPTMPDVFMQ LAQDAALAAG
YAGFVPDACL INRYIPGAKM SLHQDRDEYD HRWPVVSVSL GIPAIFQFGG LLRGDKTQRI
SLFHGDVVVW GGEDRLRFHG ILPIKQAEHP QLGEQRINLT FRKAGRDS
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