Gene Psyr_2980 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_2980 
Symbol 
ID3368500 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp3573452 
End bp3574291 
Gene Length840 bp 
Protein Length279 aa 
Translation table11 
GC content56% 
IMG OID637653326 
ProductUTP--glucose-1-phosphate uridylyltransferase and type 
Protein accessionYP_236052 
Protein GI66046211 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1210] UDP-glucose pyrophosphorylase 
TIGRFAM ID[TIGR01099] UTP-glucose-1-phosphate uridylyltransferase 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.903558 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.459831 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCAAGA AATGCTTGTT CCCAGCAGCC GGTTACGGCA CTCGCTTCCT GCCAGCGACC 
AAGGCCATGC CCAAGGAAAT GCTGCCGGTG GTCAACAAGC CACTGATCCA ATACGGTGTT
GAGGAAGCCC TCGCTGCAGG CCTGACCGAA ATTTCCATCG TGACCGGTCG TGGCAAGCGC
GCTCTTGAAG ACCACTTCGA CATCAGCTAC GAGCTCGAGC ACCAGATCAA GGGTACTGAC
AAGGAAAAGT ACCTGGTCGG TATTCGCAAG CTGATCGACG AATGCAGCTT CTCGTACACT
CGTCAGACTG AAATGAAGGG TCTGGGCCAC GCCATCCTCA GCGGTCGCCC GCTGATCGGC
AACGAAGCGT TCGCCGTGGT TCTGGCCGAT GACCTGTGCG TCAACCCTGA GGGTGATGGC
GTGCTGGCGC AGATGGTCAA GCTGCACAAG CATTATGGCT GCTCGATCAT CGCCATCCAG
GAAGTCGATC CGCAGGAAAC CAACAAGTAT GGCGTGATCG CTGGCGAAGA GATCAAGCCA
GGCCTGTTCC GCGTGACCAA CATGGTTGAA AAGCCGAAGC CTGAAGATGC GCCGTCCAAC
CTGGCGATCA TCGGCCGCTA CATCCTGACT CCGGACATCT TCGAGAAAAT CGAGCAGACC
GAGCCGGGCA AGGGCGGTGA AATTCAGATC ACCGACGCCT TGATGAAGCA GGCTGCTGAA
GGCAATGTGC TTGCGTACAA GTTCAAGGGT GAGCGTTTCG ACTGCGGTGG TGCTGAGGGT
TACATTCAGG CTACCAACTT CTGCTTCGAG CACTTCTACA AGACCGGCAA AGCTCATTGA
 
Protein sequence
MIKKCLFPAA GYGTRFLPAT KAMPKEMLPV VNKPLIQYGV EEALAAGLTE ISIVTGRGKR 
ALEDHFDISY ELEHQIKGTD KEKYLVGIRK LIDECSFSYT RQTEMKGLGH AILSGRPLIG
NEAFAVVLAD DLCVNPEGDG VLAQMVKLHK HYGCSIIAIQ EVDPQETNKY GVIAGEEIKP
GLFRVTNMVE KPKPEDAPSN LAIIGRYILT PDIFEKIEQT EPGKGGEIQI TDALMKQAAE
GNVLAYKFKG ERFDCGGAEG YIQATNFCFE HFYKTGKAH