| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_2970 |
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| Symbol | |
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| ID | 3368490 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. syringae B728a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007005 |
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| Strand | + |
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| Start bp | 3562366 |
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| End bp | 3563460 |
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| Gene Length | 1095 bp |
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| Protein Length | 364 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637653316 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_236042 |
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| Protein GI | 66046201 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG5010] Flp pilus assembly protein TadD, contains TPR repeats |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.47174 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.17281 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCAGAC TTTCTACCAC GGGGTTATCG CCTCAACCCA CTTCTCGACG TCGCTGGCTG
ATCGGCGCAG CGGCTGCAGC GCTGCTGGTG CTTTCGCTGG TTTTCTGGTG GTGGCGCATG
CCCGTCCAGA CGGCCCCGGC CAAGCTCAGT CATACCTATG CCCAGGCGCT GGAGCAGGCA
CATGACGGCA AACCCGGTGC CGCGCGCGTG CTGTACCAAC AACTGGCGCG GACTGACCTG
TCTGACGCAC AACGCATCAG CCTGCTCGCC GAACTGAGCG ACTACCCCAG CCCCCAGGCC
CTCAAGTTGC TCGATGCGGC CTTGAGTAAC CCGTCCGCTC AAGTGCGCGA GGCGGCCATC
GATGTCAGCG TCAGGCTGGT CTCCAACAGC CAGCGCAGTC TGTTGCTCGG ACCGCTGCTG
GATGACGCCG AACAATCCGT CAGGTTTCGC GCCACCGGCG CCCTGCTTGG CCTCTCCCCC
GATGAGCTGG GCCTGTACTT TGCCGTTCTG CAGCAAAGTG CCGAGGCGTT TCAGGAATCA
CTCAAGAGCC AGCCGCAAAA CGCCCAAAAC CAGTTGCAAC TGGCCAGGCT GTATCTGCAG
ACCGGCGACC TGGAACCCGC GCTCGCGGCA CTACAGCGGG CCACCGCGCT GGACCCGGGC
AATATCGAAG CAGCGCTGGC GCACATCGAA TTACTGGACC GCAAGGGCCA GGCCGAGCAG
GCGCGCGGCC TTTTCGCACA GTTGCTGGAG CACAATCCTG GCTCGTCCCT GCTCCAGCAT
GCGCTGGGCA TGTGGCTGCT GAACCACGGC CAGGCCGAAT TCGCCGTGCT CAGCCTGGCC
AAGGCCACGG AACTGGCACC CGACAACAAC GACTATCGCT ATGACCTGGC GGTGGCCCTG
CACTCGTTGA ACGAGCTCGA AGCGGCACAG CGCCAGTTGA CCCAGATCGT TCAGAACCAG
CCCGCCAATC GCAAGGCCAG GGTGCTGCTG ATCCAGTACT GGAAAGAGAA CGGCCAGTTG
CAAAACGTGC AGATTCTGCT GGCCGAGCTC GAGCAGCAGA ACCCGGATGA CCCTGTGCTG
CAACAGGGAC TGTAG
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| Protein sequence | MPRLSTTGLS PQPTSRRRWL IGAAAAALLV LSLVFWWWRM PVQTAPAKLS HTYAQALEQA
HDGKPGAARV LYQQLARTDL SDAQRISLLA ELSDYPSPQA LKLLDAALSN PSAQVREAAI
DVSVRLVSNS QRSLLLGPLL DDAEQSVRFR ATGALLGLSP DELGLYFAVL QQSAEAFQES
LKSQPQNAQN QLQLARLYLQ TGDLEPALAA LQRATALDPG NIEAALAHIE LLDRKGQAEQ
ARGLFAQLLE HNPGSSLLQH ALGMWLLNHG QAEFAVLSLA KATELAPDNN DYRYDLAVAL
HSLNELEAAQ RQLTQIVQNQ PANRKARVLL IQYWKENGQL QNVQILLAEL EQQNPDDPVL
QQGL
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