Gene Psyr_2965 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_2965 
Symbol 
ID3368485 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp3553271 
End bp3554068 
Gene Length798 bp 
Protein Length265 aa 
Translation table11 
GC content61% 
IMG OID637653311 
ProductABC transporter 
Protein accessionYP_236037 
Protein GI66046196 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1126] ABC-type polar amino acid transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0568085 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.400951 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTGATC TCGCACACAC CGCAATCCCG CCCGTCACCA CCGCGCAGAT ACAGCTGAAA 
CACGTGGTCA AGGACTTCGG CCACAACCGG ATTATCGACC ACTTGGACCT GAGCATTCCT
CAAGGTCAGA AAGTGGCCTT GATCGGCCCC AGTGGCTCGG GCAAATCAAC GGTATTGCGC
CTTATCAAGG GGCTGGAAAA CTACCAGCAA GGCAGCATAG AAGTCGCAGG CCGAGCAGTG
CCCGCGCGCA CATCCGGATG GCGCTGGCCT GGCGCGCGCA AGGCTCCGGT AGAACATCGG
GTAGGCATGG TGTTCCAGCA ATTCAACCTG TTCCCGCACC TCACCGTGCA GGAAAATGTC
ACCGAAGCGC CGTTACGGGT ACTCAGACTG CCTCGCGAAG AGGCCCTTGA GCGCGCGCAC
CAATACCTCG GGCTGGTCGG GCTTGCGCAC AAGGCCGATG CCTATCCGAG CCAGCTTTCC
GGTGGTCAGC AACAACGTGT AGCGATTGCC AGGGCGCTGG CCATGCGTCC GCAGGTCATG
TTGTTCGATG AGGTCACGTC AGCGCTCGAC CCCGAGCTGG TCGGCGAGGT CCTGGCGGTG
ATTCGCTCGA TTGCCCACGA GTTTCAGATG ACCATGCTAC TGGTGACCCA CGAGATGAAA
TTCGCTCAGG ACATCGCTGA CCGGGTGCTG TTCATGGAGG GCGGCCGCAT CGTGGCGGAC
GGCACCCCGA GCGAAATTCT GCTGAATCCG CAAAACGAGC GGACCCGAAG GTTTCTGCAG
CGGGTGGAGC AGCGCTGA
 
Protein sequence
MSDLAHTAIP PVTTAQIQLK HVVKDFGHNR IIDHLDLSIP QGQKVALIGP SGSGKSTVLR 
LIKGLENYQQ GSIEVAGRAV PARTSGWRWP GARKAPVEHR VGMVFQQFNL FPHLTVQENV
TEAPLRVLRL PREEALERAH QYLGLVGLAH KADAYPSQLS GGQQQRVAIA RALAMRPQVM
LFDEVTSALD PELVGEVLAV IRSIAHEFQM TMLLVTHEMK FAQDIADRVL FMEGGRIVAD
GTPSEILLNP QNERTRRFLQ RVEQR