Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_2965 |
Symbol | |
ID | 3368485 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | + |
Start bp | 3553271 |
End bp | 3554068 |
Gene Length | 798 bp |
Protein Length | 265 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637653311 |
Product | ABC transporter |
Protein accession | YP_236037 |
Protein GI | 66046196 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1126] ABC-type polar amino acid transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.0568085 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.400951 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCTGATC TCGCACACAC CGCAATCCCG CCCGTCACCA CCGCGCAGAT ACAGCTGAAA CACGTGGTCA AGGACTTCGG CCACAACCGG ATTATCGACC ACTTGGACCT GAGCATTCCT CAAGGTCAGA AAGTGGCCTT GATCGGCCCC AGTGGCTCGG GCAAATCAAC GGTATTGCGC CTTATCAAGG GGCTGGAAAA CTACCAGCAA GGCAGCATAG AAGTCGCAGG CCGAGCAGTG CCCGCGCGCA CATCCGGATG GCGCTGGCCT GGCGCGCGCA AGGCTCCGGT AGAACATCGG GTAGGCATGG TGTTCCAGCA ATTCAACCTG TTCCCGCACC TCACCGTGCA GGAAAATGTC ACCGAAGCGC CGTTACGGGT ACTCAGACTG CCTCGCGAAG AGGCCCTTGA GCGCGCGCAC CAATACCTCG GGCTGGTCGG GCTTGCGCAC AAGGCCGATG CCTATCCGAG CCAGCTTTCC GGTGGTCAGC AACAACGTGT AGCGATTGCC AGGGCGCTGG CCATGCGTCC GCAGGTCATG TTGTTCGATG AGGTCACGTC AGCGCTCGAC CCCGAGCTGG TCGGCGAGGT CCTGGCGGTG ATTCGCTCGA TTGCCCACGA GTTTCAGATG ACCATGCTAC TGGTGACCCA CGAGATGAAA TTCGCTCAGG ACATCGCTGA CCGGGTGCTG TTCATGGAGG GCGGCCGCAT CGTGGCGGAC GGCACCCCGA GCGAAATTCT GCTGAATCCG CAAAACGAGC GGACCCGAAG GTTTCTGCAG CGGGTGGAGC AGCGCTGA
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Protein sequence | MSDLAHTAIP PVTTAQIQLK HVVKDFGHNR IIDHLDLSIP QGQKVALIGP SGSGKSTVLR LIKGLENYQQ GSIEVAGRAV PARTSGWRWP GARKAPVEHR VGMVFQQFNL FPHLTVQENV TEAPLRVLRL PREEALERAH QYLGLVGLAH KADAYPSQLS GGQQQRVAIA RALAMRPQVM LFDEVTSALD PELVGEVLAV IRSIAHEFQM TMLLVTHEMK FAQDIADRVL FMEGGRIVAD GTPSEILLNP QNERTRRFLQ RVEQR
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