Gene Psyr_2954 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_2954 
Symbol 
ID3368474 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp3542307 
End bp3542978 
Gene Length672 bp 
Protein Length223 aa 
Translation table11 
GC content58% 
IMG OID637653300 
Productphospholipase/carboxylesterase 
Protein accessionYP_236026 
Protein GI66046185 
COG category[R] General function prediction only 
COG ID[COG0400] Predicted esterase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.231462 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAAACA TCAACTTCTC TGAACCCGCA CGCGAGTCCG AGTCGGGTAT TTTTTTCCGT 
AAGGCATGTA GCACTGTCAA CCCAAAGGCA CGGTTGCTAC TGCTTCACGG AGTAGGATCG
AACGAAGCCA ATCTCGCCAG TCTGGCCGCG TCGCTGCCCG AAGAGATCGA AATCCTGTTG
CTCCGCGGCC CGCTGCAACT GGGTCCTCAA GGCTTCGCCT GGTACCAGGT CAACTTCACC
AGCGATGGGC CTTCTTTTAA CCAGGAGCAG GCTGAGTCCA GCCGCCAGTT ATTGATCCGG
TTTATTCAGG CGCTTCCCCC GCTGCCCACT GTGATCGCCG GGTTCAGCCA GGGCGGCATC
ATGAGCTCAA GCGTCGGCGT CACACAACCT GAGCTGGTAG CAGGTTTTGC GCTGCTGAGC
GGGCGGATGC TGCGAGAAAT CGAGCCAAAG ATTGCGCCAC GTGATCAGTT GCAAGGCGTC
TCAGCCTTCA TCGCTCACGG CCAGCAGGAC AACGTACTGC CGATTGACTG GGCACATGAA
GCTGACGCCT GGCTCAGCCG GATCGGTGTG CAGCACCAGA CTCATTTTTA CGACATGGCC
CACGAGATCA TTCCGCAGGA ACTGGCTGAC TTCTCGCAAT GGCTGGACCG GACACTTTCG
CTTTCCAACT GA
 
Protein sequence
MQNINFSEPA RESESGIFFR KACSTVNPKA RLLLLHGVGS NEANLASLAA SLPEEIEILL 
LRGPLQLGPQ GFAWYQVNFT SDGPSFNQEQ AESSRQLLIR FIQALPPLPT VIAGFSQGGI
MSSSVGVTQP ELVAGFALLS GRMLREIEPK IAPRDQLQGV SAFIAHGQQD NVLPIDWAHE
ADAWLSRIGV QHQTHFYDMA HEIIPQELAD FSQWLDRTLS LSN