Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_2954 |
Symbol | |
ID | 3368474 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | + |
Start bp | 3542307 |
End bp | 3542978 |
Gene Length | 672 bp |
Protein Length | 223 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 637653300 |
Product | phospholipase/carboxylesterase |
Protein accession | YP_236026 |
Protein GI | 66046185 |
COG category | [R] General function prediction only |
COG ID | [COG0400] Predicted esterase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.231462 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAAAACA TCAACTTCTC TGAACCCGCA CGCGAGTCCG AGTCGGGTAT TTTTTTCCGT AAGGCATGTA GCACTGTCAA CCCAAAGGCA CGGTTGCTAC TGCTTCACGG AGTAGGATCG AACGAAGCCA ATCTCGCCAG TCTGGCCGCG TCGCTGCCCG AAGAGATCGA AATCCTGTTG CTCCGCGGCC CGCTGCAACT GGGTCCTCAA GGCTTCGCCT GGTACCAGGT CAACTTCACC AGCGATGGGC CTTCTTTTAA CCAGGAGCAG GCTGAGTCCA GCCGCCAGTT ATTGATCCGG TTTATTCAGG CGCTTCCCCC GCTGCCCACT GTGATCGCCG GGTTCAGCCA GGGCGGCATC ATGAGCTCAA GCGTCGGCGT CACACAACCT GAGCTGGTAG CAGGTTTTGC GCTGCTGAGC GGGCGGATGC TGCGAGAAAT CGAGCCAAAG ATTGCGCCAC GTGATCAGTT GCAAGGCGTC TCAGCCTTCA TCGCTCACGG CCAGCAGGAC AACGTACTGC CGATTGACTG GGCACATGAA GCTGACGCCT GGCTCAGCCG GATCGGTGTG CAGCACCAGA CTCATTTTTA CGACATGGCC CACGAGATCA TTCCGCAGGA ACTGGCTGAC TTCTCGCAAT GGCTGGACCG GACACTTTCG CTTTCCAACT GA
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Protein sequence | MQNINFSEPA RESESGIFFR KACSTVNPKA RLLLLHGVGS NEANLASLAA SLPEEIEILL LRGPLQLGPQ GFAWYQVNFT SDGPSFNQEQ AESSRQLLIR FIQALPPLPT VIAGFSQGGI MSSSVGVTQP ELVAGFALLS GRMLREIEPK IAPRDQLQGV SAFIAHGQQD NVLPIDWAHE ADAWLSRIGV QHQTHFYDMA HEIIPQELAD FSQWLDRTLS LSN
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