Gene Psyr_2933 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_2933 
Symbol 
ID3368453 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp3521458 
End bp3522039 
Gene Length582 bp 
Protein Length193 aa 
Translation table11 
GC content55% 
IMG OID637653279 
Productregulatory protein, TetR 
Protein accessionYP_236005 
Protein GI66046164 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.316351 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGAAAC CAGCTCAGGA CATGCGACAG CACATCATTG ATGTGGCCCG CTCGCTCATG 
ACGAACAAAG GCTATACCGC CGTCGGCCTC GCAGAGGTGT TAAGCACGGC TGGTGTACCC
AAAGGTTCGT TCTATTACTA CTTCAAATCG AAGGAAGAAT TCGGTCAGGC GCTGCTGGAA
GAGTATTTTT CCGAGTACCT GGGTCGAGTC GACGCCCTCA TGGCACGCCC CGGAAGCGGC
GCCGAGCGGT TACTGGCCTA CTTCAACTAT TGGATAGAAA CCCAGGGCAC CGACTTTCCC
GAAGGCAAGT GCCTGGTCGT CAAGCTGGGG GCGGAAGTCT GCGATTTGTC TGAAGACATG
CGTGGCGTGC TCGAGGTCGG CACAGCAAAA ATCATCAAAC GCATCACTGC CTGTGTCGAC
ATGGGTGTCG CCGACGACAG CATTCATCCC GAGGGCGATC ATGAAGGATT CGCAGAATCC
CTCTATCAGC TCTGGCTTGG CGCTTCCCTT CTGGCGAAGG TGAACAAGTC CACCGAATCT
TTCGAAAAAG CACTGACCAT GACCAAACGC CTGCTGCGGT AG
 
Protein sequence
MKKPAQDMRQ HIIDVARSLM TNKGYTAVGL AEVLSTAGVP KGSFYYYFKS KEEFGQALLE 
EYFSEYLGRV DALMARPGSG AERLLAYFNY WIETQGTDFP EGKCLVVKLG AEVCDLSEDM
RGVLEVGTAK IIKRITACVD MGVADDSIHP EGDHEGFAES LYQLWLGASL LAKVNKSTES
FEKALTMTKR LLR