Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_2933 |
Symbol | |
ID | 3368453 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | + |
Start bp | 3521458 |
End bp | 3522039 |
Gene Length | 582 bp |
Protein Length | 193 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 637653279 |
Product | regulatory protein, TetR |
Protein accession | YP_236005 |
Protein GI | 66046164 |
COG category | [K] Transcription |
COG ID | [COG1309] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.316351 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGAAAC CAGCTCAGGA CATGCGACAG CACATCATTG ATGTGGCCCG CTCGCTCATG ACGAACAAAG GCTATACCGC CGTCGGCCTC GCAGAGGTGT TAAGCACGGC TGGTGTACCC AAAGGTTCGT TCTATTACTA CTTCAAATCG AAGGAAGAAT TCGGTCAGGC GCTGCTGGAA GAGTATTTTT CCGAGTACCT GGGTCGAGTC GACGCCCTCA TGGCACGCCC CGGAAGCGGC GCCGAGCGGT TACTGGCCTA CTTCAACTAT TGGATAGAAA CCCAGGGCAC CGACTTTCCC GAAGGCAAGT GCCTGGTCGT CAAGCTGGGG GCGGAAGTCT GCGATTTGTC TGAAGACATG CGTGGCGTGC TCGAGGTCGG CACAGCAAAA ATCATCAAAC GCATCACTGC CTGTGTCGAC ATGGGTGTCG CCGACGACAG CATTCATCCC GAGGGCGATC ATGAAGGATT CGCAGAATCC CTCTATCAGC TCTGGCTTGG CGCTTCCCTT CTGGCGAAGG TGAACAAGTC CACCGAATCT TTCGAAAAAG CACTGACCAT GACCAAACGC CTGCTGCGGT AG
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Protein sequence | MKKPAQDMRQ HIIDVARSLM TNKGYTAVGL AEVLSTAGVP KGSFYYYFKS KEEFGQALLE EYFSEYLGRV DALMARPGSG AERLLAYFNY WIETQGTDFP EGKCLVVKLG AEVCDLSEDM RGVLEVGTAK IIKRITACVD MGVADDSIHP EGDHEGFAES LYQLWLGASL LAKVNKSTES FEKALTMTKR LLR
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