Gene Psyr_2913 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_2913 
Symbol 
ID3368433 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp3496639 
End bp3497553 
Gene Length915 bp 
Protein Length304 aa 
Translation table11 
GC content64% 
IMG OID637653259 
Productregulatory protein, LysR:LysR, substrate-binding 
Protein accessionYP_235985 
Protein GI66046144 
COG category[K] Transcription 
COG ID[COG0583] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0160728 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATCGCA ACGACCTGCG TCGCGTCGAC CTCAATTTGC TCATCGTTTT CGAGACTCTG 
ATGCATGAGC GCAGTGTCAC GCGTGCGGCG GAAAAGCTGT TTCTCGGTCA GCCGGCAATC
AGCGCTGCGC TGTCGCGGCT ACGCGGCCTG TTCGATGATC CACTGTTCGT GCGCACCGGG
CGCAGCATGG AGCCCACCGC CCGAGCGACG GAAATCTTCG CCCTGCTCTC CCCCGCACTC
GACTCCATCT CGACAGCGGT CAGCCGCGCC TCGGAGTTCG ACCCGGCGAC CAGCACCTCG
GTCTTCCGCA TCGGCCTGTC CGATGACGTC GAGTTCGCAC TGTTGCCCAC CCTGCTCAAG
CGTCTGCGCT CCGAAGCGCC GGGCATTGTG CTGGTGGTCA GACGGGTCAA CTACATCCTC
ATGCCCCCCC TGCTCGCCTC CGGGGAGATA TCGGTCGGCG TCAGCTACAC ACAAGACCTG
CCCGCCAACG CCAAGCGCAA GGTCCTGCGC AGGAGCAAGC CGCAATTGCT GCGCGCCGAC
TCGATACCCG GCCCGTTGAG CCTCGACGAC TTCTGCGCCC GCCCCCACGC ACTGGTCTCC
TTCGCCGGCG ACCTGAGCGG GTTCATCGAC GAACACCTGG AAAAACTCGA CCGCAAACGC
CACGTCGTCC TCGCCGTGCC CCAGTTCAAC GGCCTGGCCA CACTACTCAC CGGCACCGAC
ATCATCGCCA CCGTGCCGGA CTATGCGGCG CAGGTCCTGA CTGCCGCGGG AGGCGTTCGC
TCTGAAGACC TGCCGATTGA AACCCGAACG TTCGAACTGC ACATGGCCTG GCGCGGCGCG
CAGGATAATG ACCCCGGGGA GCGTTGGTTG AGGTCGCGGA TTCAGATGTT TTTTGGGGAT
CCGGATAGTC TTTAG
 
Protein sequence
MNRNDLRRVD LNLLIVFETL MHERSVTRAA EKLFLGQPAI SAALSRLRGL FDDPLFVRTG 
RSMEPTARAT EIFALLSPAL DSISTAVSRA SEFDPATSTS VFRIGLSDDV EFALLPTLLK
RLRSEAPGIV LVVRRVNYIL MPPLLASGEI SVGVSYTQDL PANAKRKVLR RSKPQLLRAD
SIPGPLSLDD FCARPHALVS FAGDLSGFID EHLEKLDRKR HVVLAVPQFN GLATLLTGTD
IIATVPDYAA QVLTAAGGVR SEDLPIETRT FELHMAWRGA QDNDPGERWL RSRIQMFFGD
PDSL