Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_2913 |
Symbol | |
ID | 3368433 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | + |
Start bp | 3496639 |
End bp | 3497553 |
Gene Length | 915 bp |
Protein Length | 304 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637653259 |
Product | regulatory protein, LysR:LysR, substrate-binding |
Protein accession | YP_235985 |
Protein GI | 66046144 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.0160728 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATCGCA ACGACCTGCG TCGCGTCGAC CTCAATTTGC TCATCGTTTT CGAGACTCTG ATGCATGAGC GCAGTGTCAC GCGTGCGGCG GAAAAGCTGT TTCTCGGTCA GCCGGCAATC AGCGCTGCGC TGTCGCGGCT ACGCGGCCTG TTCGATGATC CACTGTTCGT GCGCACCGGG CGCAGCATGG AGCCCACCGC CCGAGCGACG GAAATCTTCG CCCTGCTCTC CCCCGCACTC GACTCCATCT CGACAGCGGT CAGCCGCGCC TCGGAGTTCG ACCCGGCGAC CAGCACCTCG GTCTTCCGCA TCGGCCTGTC CGATGACGTC GAGTTCGCAC TGTTGCCCAC CCTGCTCAAG CGTCTGCGCT CCGAAGCGCC GGGCATTGTG CTGGTGGTCA GACGGGTCAA CTACATCCTC ATGCCCCCCC TGCTCGCCTC CGGGGAGATA TCGGTCGGCG TCAGCTACAC ACAAGACCTG CCCGCCAACG CCAAGCGCAA GGTCCTGCGC AGGAGCAAGC CGCAATTGCT GCGCGCCGAC TCGATACCCG GCCCGTTGAG CCTCGACGAC TTCTGCGCCC GCCCCCACGC ACTGGTCTCC TTCGCCGGCG ACCTGAGCGG GTTCATCGAC GAACACCTGG AAAAACTCGA CCGCAAACGC CACGTCGTCC TCGCCGTGCC CCAGTTCAAC GGCCTGGCCA CACTACTCAC CGGCACCGAC ATCATCGCCA CCGTGCCGGA CTATGCGGCG CAGGTCCTGA CTGCCGCGGG AGGCGTTCGC TCTGAAGACC TGCCGATTGA AACCCGAACG TTCGAACTGC ACATGGCCTG GCGCGGCGCG CAGGATAATG ACCCCGGGGA GCGTTGGTTG AGGTCGCGGA TTCAGATGTT TTTTGGGGAT CCGGATAGTC TTTAG
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Protein sequence | MNRNDLRRVD LNLLIVFETL MHERSVTRAA EKLFLGQPAI SAALSRLRGL FDDPLFVRTG RSMEPTARAT EIFALLSPAL DSISTAVSRA SEFDPATSTS VFRIGLSDDV EFALLPTLLK RLRSEAPGIV LVVRRVNYIL MPPLLASGEI SVGVSYTQDL PANAKRKVLR RSKPQLLRAD SIPGPLSLDD FCARPHALVS FAGDLSGFID EHLEKLDRKR HVVLAVPQFN GLATLLTGTD IIATVPDYAA QVLTAAGGVR SEDLPIETRT FELHMAWRGA QDNDPGERWL RSRIQMFFGD PDSL
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