Gene Psyr_2912 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_2912 
Symbol 
ID3368432 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp3495306 
End bp3496328 
Gene Length1023 bp 
Protein Length340 aa 
Translation table11 
GC content61% 
IMG OID637653258 
Productzinc-containing alcohol dehydrogenase superfamily protein 
Protein accessionYP_235984 
Protein GI66046143 
COG category[C] Energy production and conversion
[R] General function prediction only 
COG ID[COG0604] NADPH:quinone reductase and related Zn-dependent oxidoreductases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.823594 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0176642 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCCGCA CGATCCGTTT TCACCAGTTT GGCCCGGCCG AGGTGCTCAA AGTCGAAGAG 
CATCCTGTCG CGTCGCCTGT CACCGGCGAG GTACAGGTGC GTGTTCAGGC CATCGGTGTC
AGCTGGTACG ACGTTCTTTG GCGGCAAAAT CTCGCGGCTA CCCATGCCCG GCTGCCTGCC
GGCCTGGGTT ATGAGATGGC TGGCGTGGTT ACTGCGCTGG GTGACGGTGT GGATGATCTG
CAAGTGGGCG ACAAGGTCGC CAGTTTTCCT GCTGCCGACG CCAATCAGCA CCCGGTCTAT
GGCGAATCCA TCGTCATGCC GCGTCGGGCG CTGACCCGCT ATCCGGATGC GCTGACGCCG
GTCCAGGCCA GCGTGCATTA CACGCCGTAT CTGGTGGCTT ACTTTGCATA CGTTGATCTG
GCGCGTATCA AGTCCGGGCA GACCGTACTG GTCACCGACG CCAGCCACTG CTCCGGCCCT
GCATTCGTGC AGTTGGGCAA GGCGCTGGGG GCTCGGGTCA TCGCCGCGAC CAAGACCGAA
GACGCCCGCG AGTACCTGCT GTCCCTGGGG GCCGACAAGG TGGTGGTCAC CGAAGAACAG
GACTTGTTGA TGGCGATCAA CAAGTACACC GACAACCGTG GTGTCGATGC CGTCTTCGAT
GGTCTTGGCG GTCCGCAGAT GTCGATCATG GGCGATGTGC TGGCGCCACG TGGCAGTCTG
GTGCTGTATG GCCTGCAAGG CGGTAATCAG ACGCCGTTCC CGGCCTGTGC CGCATTTCAG
AAGAACATCC AGTTCTACGT GCATTGCCTG GGCAATTTCA CCGGCAAGCC CGAACTGGGC
ATTACCCAGG ATCAAGAAGC GCTGCAGCGT GCCTTGCAGG ACATCAACCA GATGACTCGC
GACAAGGTGC TGATGCCATT GCAGACGCGC AGCTTTCCGT TCGACCAGGT AGTGCAGGCG
CACCGTTACA TGGATGTCTG CCCGATCGGC GGGCGTGCGG TGCTGGAAGT CGAGGCGGTC
TGA
 
Protein sequence
MSRTIRFHQF GPAEVLKVEE HPVASPVTGE VQVRVQAIGV SWYDVLWRQN LAATHARLPA 
GLGYEMAGVV TALGDGVDDL QVGDKVASFP AADANQHPVY GESIVMPRRA LTRYPDALTP
VQASVHYTPY LVAYFAYVDL ARIKSGQTVL VTDASHCSGP AFVQLGKALG ARVIAATKTE
DAREYLLSLG ADKVVVTEEQ DLLMAINKYT DNRGVDAVFD GLGGPQMSIM GDVLAPRGSL
VLYGLQGGNQ TPFPACAAFQ KNIQFYVHCL GNFTGKPELG ITQDQEALQR ALQDINQMTR
DKVLMPLQTR SFPFDQVVQA HRYMDVCPIG GRAVLEVEAV