Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_2905 |
Symbol | |
ID | 3368425 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | + |
Start bp | 3484201 |
End bp | 3485778 |
Gene Length | 1578 bp |
Protein Length | 525 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637653251 |
Product | ABC transporter |
Protein accession | YP_235977 |
Protein GI | 66046136 |
COG category | [R] General function prediction only |
COG ID | [COG4172] ABC-type uncharacterized transport system, duplicated ATPase component |
TIGRFAM ID | [TIGR02323] phosphonate C-P lyase system protein PhnK |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.252651 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCGGAAA ACCTGATCGA AATCCGCGAC CTGAGCGTCG CCTTCAACGG GCAAAAAGTG GTCAGCAACC TGAGCCTGGA TGTGCGCCGC GGCGAGTGCC TGGCACTGGT CGGCGAGTCC GGTTCCGGCA AGTCGGTCAC CGCGCATTCG ATCCTGCAAT TGCTGCCCCG CAGCGGCACC CTGACCACGG GCAGCATCAC CTACCGGGGT CAACAGCTGG TGGGGGCCGA CGACCGCACC CTTCGCGAGC TGCGTGGCAA CCGGATTGCG ATGATTTTCC AGGAACCAAT GACCTCGCTG AACCCGCTGC ACAGCGTAGC CAAGCAAATC GGCGAGACAT TGTTGCTGCA TCGCGGCGTC AGTGGGCGTG AAGCGCAGAA ACGCATTGTC GAGCTGCTGG AGCTGGTCGG TATTCAGCAG CCGGAAAAAC GCCTGAAAGC CTATCCGCAC GAACTCTCCG GAGGCCAGCG TCAGCGGGTG ATGATTGCCA TGGCACTGGC CTGCGAACCG GAGCTGCTGA TTGCCGACGA ACCCACCACT GCGCTGGACG TCACGGTACA ACGCAAAATC CTCCTGCTGC TCAAGGAGCT GCAGCAGCGC CTGAACATGT CGCTGCTGTT GATCAGCCAT GACTTGAATC TGGTGCACAG CGTCGCTCAG CGCGTCTGCG TAATGCGCGC CGGCGAAATC GTCGAGCAGT CCGATTGCAA GTCGCTGTTC AAATCACCTC AGCATCCCTA CAGCCGCCTG CTGCTGGACG CCGAACCTGC CGGCGAGCCG CTGCCACGCG ACACCCGGGA AACGGTGCTG CAAGTCGACA ACCTGAAGGT CTGGTTTTCC CTGACCGGCG GCATCCTGCG GCGGCACAGG GAATACCTCA AGGCGGTGGA TGACATCAGC CTGAGCATCG AGCGCGGCAA GACCCTGGGT ATCGTCGGTG AGTCGGGTTC CGGCAAGTCG ACCCTGGGTC AGGCGATCCT GCGTCTGCTG GAGTCACGCG GCAGTATCCG CTTTCGCGGG CAGGCGCTGG ACGGCCTGAG TCAGAAACAG ATGCGCCCGT GGCGTAAAGA GATGCAAGTG GTCTTTCAGG ACCCTTACGG CAGCCTCAGC CCGCGCATGT CGGTGGCGCA GATCATCAGT GAGGGGCTGG AGGTGCACAG CCAGTACAAC CCGGCGAAAT GCGATGCAGA GGTCATTCGG GCGCTGGAAG AAGTCGGCAT CGACCCGCAG AGTCGGCATC GCTACCCCCA TGAATTTTCC GGTGGCCAGC GTCAGCGCAT CGCCATTGCC CGGGCGCTGG TGCTGAAACC CGCACTGATT CTGCTCGATG AGCCGACATC GGCGCTGGAC CGTACCGTAC AGAAACAGGT CGTGGCGCTG CTGCGCGAAC TTCAGGAAAA GCATGGCCTG ACGTATCTGT TCATCAGCCA TGACCTGGCA GTCGTCAAAG CCCTCGCCCA CGACGTGATC GTGGTCAAGG ATGGCAAAGT CGTCGAGCGT GGCGCGAGCC ATGATGTCTT CGAGGCACCG CAACATCCCT ACACGCAGGA ATTGCTGGCG GCCGCGCATC CGGAATGA
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Protein sequence | MSENLIEIRD LSVAFNGQKV VSNLSLDVRR GECLALVGES GSGKSVTAHS ILQLLPRSGT LTTGSITYRG QQLVGADDRT LRELRGNRIA MIFQEPMTSL NPLHSVAKQI GETLLLHRGV SGREAQKRIV ELLELVGIQQ PEKRLKAYPH ELSGGQRQRV MIAMALACEP ELLIADEPTT ALDVTVQRKI LLLLKELQQR LNMSLLLISH DLNLVHSVAQ RVCVMRAGEI VEQSDCKSLF KSPQHPYSRL LLDAEPAGEP LPRDTRETVL QVDNLKVWFS LTGGILRRHR EYLKAVDDIS LSIERGKTLG IVGESGSGKS TLGQAILRLL ESRGSIRFRG QALDGLSQKQ MRPWRKEMQV VFQDPYGSLS PRMSVAQIIS EGLEVHSQYN PAKCDAEVIR ALEEVGIDPQ SRHRYPHEFS GGQRQRIAIA RALVLKPALI LLDEPTSALD RTVQKQVVAL LRELQEKHGL TYLFISHDLA VVKALAHDVI VVKDGKVVER GASHDVFEAP QHPYTQELLA AAHPE
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