| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_2884 |
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| Symbol | |
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| ID | 3368403 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. syringae B728a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007005 |
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| Strand | + |
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| Start bp | 3460307 |
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| End bp | 3461308 |
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| Gene Length | 1002 bp |
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| Protein Length | 333 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 637653229 |
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| Product | periplasmic binding protein/LacI transcriptional regulator |
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| Protein accession | YP_235956 |
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| Protein GI | 66046115 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG4213] ABC-type xylose transport system, periplasmic component |
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| TIGRFAM ID | [TIGR02634] D-xylose ABC transporter, substrate-binding protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.102429 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACACCC TCAAAAGTAC GCTGCTCGCC AGCGCGCTGG CCTTGCTGTC CCTGCCGGTG
ATGGCTGACT CTGCGCACCC GAAAATAGGT TTTTCCATTG ATGACCTGCG TCTGGAACGC
TGGTCACGCG ACCGTGATTA CTTCGTTGCG GCGGCGGAAA AGCTCGACGC CAAGGTCTTC
GTGCAATCAG CGGATGCCAA TGAACAGAAA CAGATCTCGC AGATAGAAAA CCTCATCTCT
CGCGGCGTCG ATGTGATCGT CATCGTGCCG TTCAACGCCA CCGTGCTGAC CAACGCCGTT
GCCGAGGCCA AGAAGGCCGG GATCAAGGTG GTGTCGTATG ACCGGCTGAT CCTCAATGCC
GATATCGACG CGTACATTTC CTTCGATAAC GAAAAAGTCG GCGAGATGCA GGCCAACGGC
GTGCTGAAAG CAGCGCCCAA GGGCAATTAC TTCCTGCTGG GCGGCGCGCC CACCGACAAC
AACGCCAAGA TTCTGCGCGA AGGCCAGATG AAGGCGCTGC AACCGGCTAT CGACAGAGGT
GATATCAAGA TCGTCGGCCA GCAGTGGGTA AAGGAGTGGA ACCCTACCGA AGCCCTGAGC
ATTGTTGAAA ACGCCCTGAC GCGTAATAAC AACAAGATCG ATGGCATCGT CGCCTCCAAC
GACGCCACTG CCGGCGGCGC GATTCAGGCC CTCGCCGCAC AGAAACTGGC CGGCAAAGTC
CCTATCTCGG GTCAGGACGC GGACCTCGCG GCGGTCAAGC GGGTCATCGA TGGCACGCAG
ACCATGACTG TCTACAAGCC GCTGAAACTG ATTGCCACGG AAGCCGCCAA GCTCTCTGTG
CAACTGGCAC GCAATGAGAA ACCCGATTTC AGCTCGAAAT ACGACAACGG CAGCAAACAA
GTCGACACCA TCCTGCTGAC GCCTACAGCG TTGACCAAGG ACAACATCGA CCTGCTGGAG
AAAGACGGGT TCTATACCAA GGCGCAGATT GACGGGCAAT GA
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| Protein sequence | MNTLKSTLLA SALALLSLPV MADSAHPKIG FSIDDLRLER WSRDRDYFVA AAEKLDAKVF
VQSADANEQK QISQIENLIS RGVDVIVIVP FNATVLTNAV AEAKKAGIKV VSYDRLILNA
DIDAYISFDN EKVGEMQANG VLKAAPKGNY FLLGGAPTDN NAKILREGQM KALQPAIDRG
DIKIVGQQWV KEWNPTEALS IVENALTRNN NKIDGIVASN DATAGGAIQA LAAQKLAGKV
PISGQDADLA AVKRVIDGTQ TMTVYKPLKL IATEAAKLSV QLARNEKPDF SSKYDNGSKQ
VDTILLTPTA LTKDNIDLLE KDGFYTKAQI DGQ
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