| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_2882 |
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| Symbol | |
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| ID | 3368401 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. syringae B728a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007005 |
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| Strand | - |
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| Start bp | 3457488 |
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| End bp | 3458687 |
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| Gene Length | 1200 bp |
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| Protein Length | 399 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637653227 |
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| Product | helix-turn-helix, AraC type:periplasmic binding protein/LacI transcriptional regulator |
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| Protein accession | YP_235954 |
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| Protein GI | 66046113 |
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| COG category | [K] Transcription |
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| COG ID | [COG1609] Transcriptional regulators
[COG2207] AraC-type DNA-binding domain-containing proteins |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.677365 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.592102 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAACCG TACCTCCCGT TCACCGTATC GCGCTGTTGT TCAACGGCAG CAAGATTTAT
GACCGCGGCA TCATCAGCGG TATCGGCAAC TACCTCAGCA GCACCCGGGT GTCCTGGGAC
CTGTTCCTGG AGGAGGATTT CCTCTGTCGC CTGAAAGGCA TCGAGCGCTG GCAGGGCGAC
GGGATCATTG CCGATTTCGA TGACCCGCTG ATCGGCGAGG CACTGGCCGG GATCAAACTG
CCGGTGGTAG CGGTGGGTGG GTCCTATCAG GACGAGCGCG CCTACCCGAA GGGCATTCCT
TATGTTGCGA CTGACAATCA CGCCTTGATC AAGGCGGCTT ACGAGCACCT GATCGAGGCC
GGGCTGACGC GCTTTGCCTG CTTCAGCCTG CCTGAAGCGC AAGCCAATCG CTGGGCTCAG
GAGCGCGAGC AGGCCTTTCG CCGCCTGCTG CAGCGCGACG GCCTGCACGC CGAGATCTAT
CGTGGCCTGG GCACCAGCGC GCCGCTCTGG GACAGCGCGG TAGAACAGCA GATCGCCTGG
CTGCAAAGCC TGCCCAAGCC GATCGGCATC ATCGCAGTGA CCGACGCCCG CGCTCGTCAG
CTATTGCAGG CCTGCCTGAC CGCCGGAATT GCCGTCCCCG AACAGGTGGC GCTGATCGGC
ATCGACAATG ATCCGTTGAC CAGGACCCTC ACTCGCGTGC CACTGAGTTC GGTCGTTCAG
GGCACCGACA CCATGGGCCG CACCGCCGCA CGTCTGCTGC ACCAGATGCT GCACGGCATG
CCGTCCTCGG GTACCCACAT TCTGATACCG CCGGATACTG TCAACGTGCA GGCTTCGAGT
CTGCATCAGC CTTTGGGTGA CCCCTATGTC ATGCAAGCGC TGCTGTTTAT CCGGCAGTAC
GCGTGCCAAG GCATCAAGAC TGCACAGGTC GCCGCCTACG TGGGCGTTTC GCGCTCGTCA
CTGGAGTCAC ACTTTCGCCG CGTAAGGGGC TGTAGCGTGC ATGACGAGAT CCTGCGTTTC
AAACTGGCCG CCGCTGCAAA CGGACTGGAA AACACCGGGC TGGCCATTGC CGAAATCGCC
CGTGATTGTG GTTTTCGGTC TGCGCAATAC CTGCACACCG TGTTTCGTCG CGAGTTCGGC
TGCACGCCGC GAGAGTACCA GCAGGGTGCC AATGCGGCCG TGCAATGCTC AAGTGCCTGA
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| Protein sequence | MKTVPPVHRI ALLFNGSKIY DRGIISGIGN YLSSTRVSWD LFLEEDFLCR LKGIERWQGD
GIIADFDDPL IGEALAGIKL PVVAVGGSYQ DERAYPKGIP YVATDNHALI KAAYEHLIEA
GLTRFACFSL PEAQANRWAQ EREQAFRRLL QRDGLHAEIY RGLGTSAPLW DSAVEQQIAW
LQSLPKPIGI IAVTDARARQ LLQACLTAGI AVPEQVALIG IDNDPLTRTL TRVPLSSVVQ
GTDTMGRTAA RLLHQMLHGM PSSGTHILIP PDTVNVQASS LHQPLGDPYV MQALLFIRQY
ACQGIKTAQV AAYVGVSRSS LESHFRRVRG CSVHDEILRF KLAAAANGLE NTGLAIAEIA
RDCGFRSAQY LHTVFRREFG CTPREYQQGA NAAVQCSSA
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