Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_2867 |
Symbol | |
ID | 3368386 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | + |
Start bp | 3441397 |
End bp | 3442788 |
Gene Length | 1392 bp |
Protein Length | 463 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637653214 |
Product | sensor histidine kinase |
Protein accession | YP_235941 |
Protein GI | 66046100 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.0147797 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.0868919 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAATCGA GCATCTCCAC CAAACTGTTT GTCGCGGTAC TGGCCAGCGT GCTGTCAGTG ATCCTGATCA TGGGCCTGAC CGCGAACTGG AGTTTTGCCC GCGGCTTTCT GGGCTACCTC AACGAACAGG CCATGCAACG CATGTCGCCG GTCCTGCCGC GGTTGGCCGC TGCCTATGCA CGCGAAGGCA GTTGGGAATT CATGCGTGAC AACAAGGATC GCTGGTTCGA AGTGATGCGC CCGGAACCGG CACAGGATTT CGCCATCCCC GGACTGGCGA CACCGCCTAC TTCCGACTTG ACCGGCGCGG TGTTCCGGAT CGCGCTGCTG GATGCGCAGA AGAACCTGGT GATGGGATTC CCAGGGGTCC ATGACGATGA ATTCATGCGC CCGGTGGAAG TCGACGGCAA CGTCGTTGGC TGGATGGCGG TCACGCCCTT TCAAAGTGTC AGCGAAGCCG GTGGCGAGCG CTTTCAGCAG TATCAGTTGC GCGCCAGCCT GGCGATGGGT GTGCTGTCAC TGCTGCTGGC GGTGCTGATT GCCTGGTGGA TCGCGCGCAC CCTGCTCGAC CCGGTCAAGC GGGTGGCCGC AGCAACCCAT CGCCTCGCCG CAGGTGAATA CGCCAGCCGC GTGGCGGTGT CCTCCAACGA CGAGGTGGGT CAACTGGCGC GCGACTTCAA CCAGCTGGCG TACACCCTGG AACGCAATGA GAAGATGCGC CGCGAATTCA TGGCCGATGT GTCCCATGAG CTGCGCACCC CGCTGTCGGT CTTGCGTGGC GAACTGGAAG CCATCGAGGA TGGCGTGCGC ACACTGGATC AGGCATCGAT GAAGTCCCTG CAGGGCGAAG TCGGCATGCT CAGCAAGCTG GTGGATGATC TGTATGAGCT GTCCCTGGCG GATGTGGGCG CCCTGACCTA CCGCAAGGTC GACTGTGACC TGGCGGAGCT GCTGACGAAT ATCACTGACA TGTTCGAAGA GCGTTGCGCA GCCCGTCAGT TGCATTTGCA GTTGGAGCTT GCTGGCGGAG CTCTGCCGGT GCATGCAGAC CCAGGGCGCC TGCAGCAATT GATCGGCAAC CTTCTGGAAA ACTCGGTGCG CTACACCGAT GCCGGGGGGA CAGTGCATGT GCGTGCCGCT CTGCAGGGCG ATGAGGTGCG CGTCGATGTG ATGGATTCCG GACCCGGCGT CGACCCGCAG CAATTGCCCA GACTGTTCGA ACGCTTCTAT CGCGGTGAAA CCTCGCGTAA CCGCGCCAGC GGCGGTGCGG GTCTGGGGTT GGCGATCTGT CACAGCATCG CCCTCGCCCA CGGCGGCACC CTGAGCGCCG ACCACTCGCC CACAGGCGGC CTCTGGCTGA CCCTGTGCCT GCCAGGACAC CTGCGCCCAT GA
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Protein sequence | MKSSISTKLF VAVLASVLSV ILIMGLTANW SFARGFLGYL NEQAMQRMSP VLPRLAAAYA REGSWEFMRD NKDRWFEVMR PEPAQDFAIP GLATPPTSDL TGAVFRIALL DAQKNLVMGF PGVHDDEFMR PVEVDGNVVG WMAVTPFQSV SEAGGERFQQ YQLRASLAMG VLSLLLAVLI AWWIARTLLD PVKRVAAATH RLAAGEYASR VAVSSNDEVG QLARDFNQLA YTLERNEKMR REFMADVSHE LRTPLSVLRG ELEAIEDGVR TLDQASMKSL QGEVGMLSKL VDDLYELSLA DVGALTYRKV DCDLAELLTN ITDMFEERCA ARQLHLQLEL AGGALPVHAD PGRLQQLIGN LLENSVRYTD AGGTVHVRAA LQGDEVRVDV MDSGPGVDPQ QLPRLFERFY RGETSRNRAS GGAGLGLAIC HSIALAHGGT LSADHSPTGG LWLTLCLPGH LRP
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