Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_2863 |
Symbol | |
ID | 3368382 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | - |
Start bp | 3433637 |
End bp | 3435376 |
Gene Length | 1740 bp |
Protein Length | 579 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637653210 |
Product | feruloyl esterase |
Protein accession | YP_235937 |
Protein GI | 66046096 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.00992534 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.260718 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAACCCT CCCAGCCGAA GTACGCCCAC GCCTTGTTGC TGCTGGTCAC TTCACTCAGC ATTCAGACAC CGGCTCTGGC CCGTATGGCA TCTTCTGCAA CCACCGACAA TACGTCCCGG CTTGCAGTGG TCAAACCGGT CAGCAGCTGT GCTGCACTAA GCAGCGTGGA ACTCAGTGAT ATCGGCGGGC AGGGCAGTCG TGTGCTAGCG GCCAGTGAAT CGACGCGTGA CGGTGTTGCG GTGTGTGCCG TAGAAGCGCG GCTGGCGCCC GAGATCAACT TCAGGCTCGA GCTGCCAACC GGCACCTGGG AGCAGCGCTA TCTGCAAGTC GGCTGCGGCG GATTGTGTGG CAACGTCAAC TCGACCGTGC GCGCCGCTGA TGGCTGCACA TCCCTGAGTG CTGGCGGATT CGCGATGGCT TCAACCGACA TGGGCCATCG GGCGGCAGAC GAGCATTTTG GCGACGACCC GCAAAAGCGT GCCGATTTCG CCCATCGTGG TGTGCACCTC ACTGCGCTGG CCTCGAAGAA ACTGATCGCC GCGTTCTATG GCCGCAAAGC AGAATACGCT TACTTCAGTG GCTGCTCGGA CGGCGGCCGC GAGGCATTGA TCGAAGCGCA GCGTTACCCT GACGATTTCG ACGGCATCAT TGCCGGAGCC CCGGCGCTCA ACTTTCAAGT GCAGAAAACC CTGTATCACG GCTGGATGGC GCGCTCCAAC CGCGGCGCGG ACGGCAAGCC GATTCTGCTC GCTTCACGAT TGCCGTTGCT GCACAAGGCT GTACTCGACC AATGCGATCT GCTGGACGGG CAGATCGATG GCCTTATAGC GGATCCGCGT ATCTGCCATT TCGAACCCGC CGCGCTGCAA TGCAAGGCAT CTGCCGACCC CGCCACGTGC CTGAGCGCAG AGGAGGTGGC CACGGTCAGA CGCTTTTACG AAGGCCCGAA AGACGCTGCC AGTGGCGAGC GGCTGACCCT GGGCGGCCCG CAGCCGGGCT CGGAACTGGC CTGGGCTGGC GTGTTCGTGC CGGTCAGCGC CGATCAGACG GTGTACAGCG AAAAGGCGGC GCTGGAGGCC ATTCGCAATG TCGTGTTCGA GAAGAACCCG CCTGCAAGTT TCGATTTGAA CGCGCTGGAC TTCGACAAAA AAACCTTTGA CCAACTGCGC CCGCTGCATG CGCTGTACGA CGCTACCAAC CCCGATCTTT CGCCATTCGC CAGCCGCGGC GGCAAGCTGA TCCTCTGGCA CGGCTGGGCT GACCCGAACG TCTCACCGCT CAACACCCTG GCGTATCACG AGGCGCTTGA AGCCGAGATG GGCAAGACCC GCACCGAGGC GTTCTCGAGG CTGTACATGC TGCCCGGCGT CTATCACTGC GGCGGCGGGG AAGGGCCAAG CCTGGTCGAT CTGCTGACAC CGGTCATGGC CTGGGTCGAA AAAAGCCGGG CCCCGGATGC CATCGTTGTC AGGCAGGCAG GCCCCGACAA GGCCGGCAAC AGGCAGAGAC CGCTTGCACA GTCACTGCCG GCGTCCATGG TCAAGGAAAA CGTGGGCAAT CGCGGACGCA CCCGCAAGGT CTTCCCGTAC CCGTTCATGG CCGAGTACGA CCACAAGGGC TACGCGAAAA ACGCAAACAG CTACCAGCGC GCCCAGCCGC TGACTACGGA AAAAACACCG CAATGGATGG GCAGCGGGTT CTTCAAACCG TATACGTCCC TGGAACGTCA GGCGCAGTAA
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Protein sequence | MKPSQPKYAH ALLLLVTSLS IQTPALARMA SSATTDNTSR LAVVKPVSSC AALSSVELSD IGGQGSRVLA ASESTRDGVA VCAVEARLAP EINFRLELPT GTWEQRYLQV GCGGLCGNVN STVRAADGCT SLSAGGFAMA STDMGHRAAD EHFGDDPQKR ADFAHRGVHL TALASKKLIA AFYGRKAEYA YFSGCSDGGR EALIEAQRYP DDFDGIIAGA PALNFQVQKT LYHGWMARSN RGADGKPILL ASRLPLLHKA VLDQCDLLDG QIDGLIADPR ICHFEPAALQ CKASADPATC LSAEEVATVR RFYEGPKDAA SGERLTLGGP QPGSELAWAG VFVPVSADQT VYSEKAALEA IRNVVFEKNP PASFDLNALD FDKKTFDQLR PLHALYDATN PDLSPFASRG GKLILWHGWA DPNVSPLNTL AYHEALEAEM GKTRTEAFSR LYMLPGVYHC GGGEGPSLVD LLTPVMAWVE KSRAPDAIVV RQAGPDKAGN RQRPLAQSLP ASMVKENVGN RGRTRKVFPY PFMAEYDHKG YAKNANSYQR AQPLTTEKTP QWMGSGFFKP YTSLERQAQ
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