Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_2859 |
Symbol | |
ID | 3368377 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | - |
Start bp | 3430499 |
End bp | 3431137 |
Gene Length | 639 bp |
Protein Length | 212 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 637653205 |
Product | isochorismatase hydrolase |
Protein accession | YP_235933 |
Protein GI | 66046092 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG1335] Amidases related to nicotinamidase |
TIGRFAM ID | |
| 

|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.607414 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.0688366 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGCAAAC CCCTTGTCCG CTGGCCGATC AATCCGCTCA GAACGGCGGT CATCGTTGTA GACATGCAAA AGGTATTTTG TGAGCCCAGC GGGGCGTTGT ACGTAAAAAG TACTGCGGAC ATCGTCCAGC CTATCCAGAT GCTGCTGCAA ACCGCACGGG CTGCTCGGGT GATGGTGGTT TATCTTCGCC ATATCGTGCG CGGCGATGGT TCTGATACCG GGCGCATGCG TGATCTTTAT CCGAATGTGG ACCAGATACT GGCACGGCAT GATCCGGGCG TTGAGGTCAT CGAAGCACTC GCGCCTCGGC CCGGTGACGT GATTGTCGAC AAGCTGTTTT ACAGCGGCTT TCATAACACG GACCTGGACA CCGTGCTGCG TGCGCGGGAT GTCGACACGA TCATCGTCTG CGGTACCGTC ACCAATGTGT GTTGTGAAAC CACGATCAGG GACGGCGTGC ATCGTGAATA CAAAGTCATC GCGCTGAGCG ACGCCAATGC TGCGATGGAC TACCCGGACG TCGGGTTCGG CGCTGTTTCA GCTGAAGAAG TTCAGCGAAT ATCCCTGACG ACGATTGCCT ATGAGTTCGG TGAAGTAACG ACGACCGCCG ATGTCATCCA GCGTATTGCA AGCGCCTGA
|
Protein sequence | MSKPLVRWPI NPLRTAVIVV DMQKVFCEPS GALYVKSTAD IVQPIQMLLQ TARAARVMVV YLRHIVRGDG SDTGRMRDLY PNVDQILARH DPGVEVIEAL APRPGDVIVD KLFYSGFHNT DLDTVLRARD VDTIIVCGTV TNVCCETTIR DGVHREYKVI ALSDANAAMD YPDVGFGAVS AEEVQRISLT TIAYEFGEVT TTADVIQRIA SA
|
| |