Gene Psyr_2794 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_2794 
Symbol 
ID3368312 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp3377410 
End bp3378711 
Gene Length1302 bp 
Protein Length433 aa 
Translation table11 
GC content58% 
IMG OID637653143 
Producthypothetical protein 
Protein accessionYP_235871 
Protein GI66046030 
COG category 
COG ID 
TIGRFAM ID[TIGR01547] phage terminase, large subunit, PBSX family 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.128294 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGAGCC TTAACGTTCC GCAATCGAAG TTCCTGCTGC TGCCCCACAA GTTTCGTGCA 
TTCGTTGCCG GGTTCGGCTC CGGTAAGACG TGGGTCGGCT GCTCGGCGCT GAGCAAGCAC
TTCATGGAGT GGCCTGGCGT CAACGCTGGT TACTTTGCAC CGACTTACCC GCAGATCAGG
GACATCTTTT ATCCAACGAT GGAAGAGGTG GCCTACGAGT GGGGCCTGAA GACAAAGATC
AATCAGGCGA ACCATGAGGT TCACATCTAC AGCGGTCGAC AGTATCGCGG CACCGTGATC
TGTCGCTCGA TGGAGAAGCC ACAGACCATT GTCGGCTTCA AGGTCGGACA CGCCCTCGTC
GATGAGCTGG ACGTTCTGAC CTCAATCAAG GCGCAGCAGG CCTGGCGCAA GATCATCGCG
CGAATGCGTT ACAACCTGCC CGGGCTGAAG AACGGCGTGG ACGTCACCAC GACACCGGAA
GGCTTCAAGT TCGTCTTCCT GCAGTTCGTG AAGCAGCTGC GTGACAAGCC GGCGCTCAAA
GAGATGTATG GGCTCATCCA GGCCAGCACC TTCGACAACG AGCTGAACCT GCCGGACGAC
TACATCCCGT CGCTGATGGA GTCATACCCC GAGCAATTGA TCAGGGCGTA CCTGAACGGC
CAATTCGTCA ACCTGACGTC TGGGTCGATC TACCACGCGT ATGACCGCAA GCTGAACCAG
TGTTTCGACA CGGTGCAGGC CGGTGAGCCT CTGTTCATCG GCATGGACTT CAACGTCGGC
AAGATGGCAG CGATCACGCA TGTGAAGCGT GACAAGGGCC TTCCCCGAGC CGTGGACGAG
TTCATGGACG GCTACGACAC GCCCGACATG ATCCGGCGCA TCAAGGAACG CTACTGGCGC
CACGATGGCG ATAAATACAT CAAGTCCTGC GAAATCAGGG TTTACCCAGA CGCCTCCGGT
GACTCGCGTA AGTCAGTCAA TGCCAGCGTC ACGGATATCG CCATGCTCAA ACAGGCCGGT
TTCACAGTGA TCGCACCTGC GGCCAACCCT CCGGTGAAGG ATCGAATCAA CGCCATGAAC
GCGATGTTTT GCAACGCGCA GGGCGAGCGC CGATACCTGG TCAACCCTTT CACCTGCCCG
ACATATGCCG ATGGCCTTGA GCAGCAGGTC TGGGCGGCCA ATGGCGAACC CGACAAATCA
CAAGGCAACG ACCACGCGAA CGATGGCGGC GGTTATTTCA TCCATCGCGA GTACCCGATC
ATAAAACCGG TCACCTCTCT AAACCTGGGA TACGCCCGAT GA
 
Protein sequence
MPSLNVPQSK FLLLPHKFRA FVAGFGSGKT WVGCSALSKH FMEWPGVNAG YFAPTYPQIR 
DIFYPTMEEV AYEWGLKTKI NQANHEVHIY SGRQYRGTVI CRSMEKPQTI VGFKVGHALV
DELDVLTSIK AQQAWRKIIA RMRYNLPGLK NGVDVTTTPE GFKFVFLQFV KQLRDKPALK
EMYGLIQAST FDNELNLPDD YIPSLMESYP EQLIRAYLNG QFVNLTSGSI YHAYDRKLNQ
CFDTVQAGEP LFIGMDFNVG KMAAITHVKR DKGLPRAVDE FMDGYDTPDM IRRIKERYWR
HDGDKYIKSC EIRVYPDASG DSRKSVNASV TDIAMLKQAG FTVIAPAANP PVKDRINAMN
AMFCNAQGER RYLVNPFTCP TYADGLEQQV WAANGEPDKS QGNDHANDGG GYFIHREYPI
IKPVTSLNLG YAR