Gene Psyr_2790 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_2790 
Symbol 
ID3368308 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp3373615 
End bp3374343 
Gene Length729 bp 
Protein Length242 aa 
Translation table11 
GC content60% 
IMG OID637653139 
Producthypothetical protein 
Protein accessionYP_235867 
Protein GI66046026 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.414281 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.065462 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCAGAAG AAAACGAAAT CGACCTGGAA AACCCGGCAA TCAAGGCCGC TATCGCGACT 
GCCGTTGAAG CATCCGTTTC GGGTCTGAAA ACCAAAAATA CCGAGCTGCT GGGCAAGTTG
AAAGACACCT CCACCAAGCT GACCCAGTTC GAAACCCAGT TTGAGGGCAT CGACATCGAC
GCCGTCAAAG GGCTGCTGAG CCGCGCCGGT CAGGACGAGG AAACCAAGCT GCTTACAGAG
GGCAAGGTGG ATGAGGTTTT TAACAAGCGC ACCGAGCGTC TGCGCGGTGA CTATGAAAAG
CAGTTGAAGG CAATCAGCGA GCGCGCGACG AAGGCTGAAA CATTCGCCGC CAAGTTTCAG
GGCAAGGTCC TGGGCGACTC GGTGCGCGGC GCAGCTCTCA AAGCCGGCGC GCTGCCTGAA
GCAACTGACG ACATCATCCT GCGCGCCAAA GGCGTGTTCT CACTGAACGA GGAGGGCGAA
GCGGTCGCCG TTGATGAGTC TGGCCAGACC ATCCTTGGCA AGGACGGCAA GACCCCTCTG
ACCCCGCTCG AATGGGCGGA ATCCTTGCGC GAAAGCGCTC CTCACCTGTG GCCAAGGGCC
TCGGGTACGA ATGCCCCGGG CGGGGGTGGC GGCCAGGCTG CACTGAAGCG CTCCGAAATG
ACAGCCACGC AAAAGCGCGA CTACCAGCGC AAGCACGGCC AAACCGCATA CCTCAATTTG
CCCAAGTAA
 
Protein sequence
MAEENEIDLE NPAIKAAIAT AVEASVSGLK TKNTELLGKL KDTSTKLTQF ETQFEGIDID 
AVKGLLSRAG QDEETKLLTE GKVDEVFNKR TERLRGDYEK QLKAISERAT KAETFAAKFQ
GKVLGDSVRG AALKAGALPE ATDDIILRAK GVFSLNEEGE AVAVDESGQT ILGKDGKTPL
TPLEWAESLR ESAPHLWPRA SGTNAPGGGG GQAALKRSEM TATQKRDYQR KHGQTAYLNL
PK