Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_2790 |
Symbol | |
ID | 3368308 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | - |
Start bp | 3373615 |
End bp | 3374343 |
Gene Length | 729 bp |
Protein Length | 242 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637653139 |
Product | hypothetical protein |
Protein accession | YP_235867 |
Protein GI | 66046026 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.414281 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.065462 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGGCAGAAG AAAACGAAAT CGACCTGGAA AACCCGGCAA TCAAGGCCGC TATCGCGACT GCCGTTGAAG CATCCGTTTC GGGTCTGAAA ACCAAAAATA CCGAGCTGCT GGGCAAGTTG AAAGACACCT CCACCAAGCT GACCCAGTTC GAAACCCAGT TTGAGGGCAT CGACATCGAC GCCGTCAAAG GGCTGCTGAG CCGCGCCGGT CAGGACGAGG AAACCAAGCT GCTTACAGAG GGCAAGGTGG ATGAGGTTTT TAACAAGCGC ACCGAGCGTC TGCGCGGTGA CTATGAAAAG CAGTTGAAGG CAATCAGCGA GCGCGCGACG AAGGCTGAAA CATTCGCCGC CAAGTTTCAG GGCAAGGTCC TGGGCGACTC GGTGCGCGGC GCAGCTCTCA AAGCCGGCGC GCTGCCTGAA GCAACTGACG ACATCATCCT GCGCGCCAAA GGCGTGTTCT CACTGAACGA GGAGGGCGAA GCGGTCGCCG TTGATGAGTC TGGCCAGACC ATCCTTGGCA AGGACGGCAA GACCCCTCTG ACCCCGCTCG AATGGGCGGA ATCCTTGCGC GAAAGCGCTC CTCACCTGTG GCCAAGGGCC TCGGGTACGA ATGCCCCGGG CGGGGGTGGC GGCCAGGCTG CACTGAAGCG CTCCGAAATG ACAGCCACGC AAAAGCGCGA CTACCAGCGC AAGCACGGCC AAACCGCATA CCTCAATTTG CCCAAGTAA
|
Protein sequence | MAEENEIDLE NPAIKAAIAT AVEASVSGLK TKNTELLGKL KDTSTKLTQF ETQFEGIDID AVKGLLSRAG QDEETKLLTE GKVDEVFNKR TERLRGDYEK QLKAISERAT KAETFAAKFQ GKVLGDSVRG AALKAGALPE ATDDIILRAK GVFSLNEEGE AVAVDESGQT ILGKDGKTPL TPLEWAESLR ESAPHLWPRA SGTNAPGGGG GQAALKRSEM TATQKRDYQR KHGQTAYLNL PK
|
| |