Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_2778 |
Symbol | |
ID | 3368296 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | - |
Start bp | 3363892 |
End bp | 3364641 |
Gene Length | 750 bp |
Protein Length | 249 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637653127 |
Product | Phage minor tail protein L |
Protein accession | YP_235855 |
Protein GI | 66046014 |
COG category | [S] Function unknown |
COG ID | [COG4672] Phage-related protein |
TIGRFAM ID | [TIGR01600] lambda-like phage minor tail protein L |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0268125 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.0120943 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCGTTGA TTGCTGACAT CCAGGCGCTT GAGCCAGGCA GCGAAGCATT GCTGTTTGAG CTCGATGGCT CTGATTACGG CGCAGACATT TTGCGCTTCC ACGGTCATGC CATCCCGCAC ACTGCCGCTG AATTGATAGC AGCCGGCCTT GAGGCTGATC AGCTGCCCGC CAAATCAATC TGGTGGCAAG GCAATGAGTA TGGGGCCTGG CCCATGCAGA TTGACGGCAT TGAAGCGAAT GGCGACGGTA CGGCAGTCCG GCCCACGCTT TCCGTGGGTA ACGTCAACGG GCGCATCACG GCGCTCTGTT TGGCATTCGA GGATCTGCTC GAGTTCAAGC TTACGATGCG CCATACGCTC GGCAGGTACC TGGACGCCGA GAACTTTCCT GGCGGCAACC CCGACGCTGA TCCTACTCAG GAGTCTATCG AGGTCTGGTA TCTCGATCAG AAAACCAATG AGGACGGTGA AACGGTCAGC TGGGAGCTGG CCAGCCCGGG CGACGTCGGC GGCGAATCGA TTGGCCGGCA GATGACCACG CTTTGTCACT GGTGCCTCAC TGGTGGATAT CGCGGGCCAA ACTGCGGCTA CACCGGGCCA TACGTCGACA AGGACGGTCA GCCCACCGAT AACCCTGAAC TTGATGTCTG CGATGCCACG CTGACGCGCG GCTGCACGCC GCGCTTCGGG GCTGGCAACG AAGTACCCTT TGGCGGTTTC CCCGCCGTAT CCCTGATCGC TCGGAGCTGA
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Protein sequence | MPLIADIQAL EPGSEALLFE LDGSDYGADI LRFHGHAIPH TAAELIAAGL EADQLPAKSI WWQGNEYGAW PMQIDGIEAN GDGTAVRPTL SVGNVNGRIT ALCLAFEDLL EFKLTMRHTL GRYLDAENFP GGNPDADPTQ ESIEVWYLDQ KTNEDGETVS WELASPGDVG GESIGRQMTT LCHWCLTGGY RGPNCGYTGP YVDKDGQPTD NPELDVCDAT LTRGCTPRFG AGNEVPFGGF PAVSLIARS
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