Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_2767 |
Symbol | |
ID | 3368285 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | - |
Start bp | 3353250 |
End bp | 3353783 |
Gene Length | 534 bp |
Protein Length | 177 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637653116 |
Product | glycoside hydrolase family protein |
Protein accession | YP_235844 |
Protein GI | 66046003 |
COG category | [R] General function prediction only |
COG ID | [COG3179] Predicted chitinase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.32693 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.0234553 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCCTATCA CAGCGCAGCA ACTGCTGCAG ATCCTCCCGA ACGCCGGCCA GAAAGCCGGC GTTTTTGCAC CCGTTCTCAA TACGGCGATG AGCAAGTACC AGATCGTGAC ACCGCTGCGC ATCGCGGCAT TCATTGCCCA GGTCGGTCAT GAATCCGGCC AGCTGCGCTA CGTCCGCGAG ATTTGGGGGC CGACTCCGCA GCAGTTGGGG TACGAGGGGC GTAAAGACCT GGGCAATACC GTGCCGGGCG ATGGCTCCAA ATACCGCGGG CGCGGCCTGA TCCAGATCAC CGGGCGGGCG AACTACGCCG AGTGCGCCGA AGCGCTGGGC CTGGACCTGA TCAACCATCC CGAATTGCTC GAGCTGGCGC AGCACGCCGC GATGTCGGCT GCGTGGTTCT GGCACCGGGC CGCGCTCAAC ACGCTGGCCG ACAAGGGCGA TTTCCTGACG ATCACCCGTC GCATCAATGG CGGCACGAAC GGACTGGCTG ATCGGCAGGC GCTGTACGCC CGAGCGCTTG AGGTGCTGGC GTGA
|
Protein sequence | MPITAQQLLQ ILPNAGQKAG VFAPVLNTAM SKYQIVTPLR IAAFIAQVGH ESGQLRYVRE IWGPTPQQLG YEGRKDLGNT VPGDGSKYRG RGLIQITGRA NYAECAEALG LDLINHPELL ELAQHAAMSA AWFWHRAALN TLADKGDFLT ITRRINGGTN GLADRQALYA RALEVLA
|
| |