Gene Psyr_2755 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_2755 
Symbol 
ID3368272 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp3342992 
End bp3344071 
Gene Length1080 bp 
Protein Length359 aa 
Translation table11 
GC content63% 
IMG OID637653103 
Product2-nitropropane dioxygenase, NPD 
Protein accessionYP_235832 
Protein GI66045991 
COG category[R] General function prediction only 
COG ID[COG2070] Dioxygenases related to 2-nitropropane dioxygenase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0669905 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0255247 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTCAAT GGCCAGATAG CCGCATCACT GAACTGTTTG CCGTCGAACT GCCGCTGTTG 
CAAGCCCCCA TGGCGGGCGC CAGCGGATCG CAGATGGCCA TTGCTGTGGC TCAGGCTGGC
GGCTTGGGGG CATTGCCCTG CGCCATGCTC ACCCCTGAGA AAATCGAACA GGAAGTAGCG
ACTTTCAGGC AGCAGACCGG TAACGCTCCG CTGAACCTGA ATTTCTTCTG CCATCAGCCT
CCGGCCCACG ATGCCGAGCG CGCCGAACGC TGGAAGCAGT CGCTCAAGCC CTATTACGAG
GAATTGGGTG CCGATTTCGA TGCGCCGACA CCAGTCTCCA ACCGCGCGCC CTTCGACAGC
GACAGCTGCA CATTGATCGA GCGCTTGAGG CCGGAAGTGG TGAGTTTCCA TTTCGGCCTT
CCGCAGCCAT CGTTACTGGA TCGGGTCCGG GCCACGGGTG CAAAGATCAT CTCGTCAGCC
ACCACGGTCG AGGAAGCGAT CTGGCTGGAG CAACACGGCT GCGACGCGGT GATTGCCATG
GGCTACGAAG CAGGCGGCCA TCGGGGGCTG TTCCTCAGCG ATCAACTGCA CACCCAGGTC
GGCACCTTTG CGCTGGTCCC GCAGATCGCT GACGCGACAA GCATCCCGGT CATCGCCGCA
GGTGGTATCG CGGACGGTCG CGGTGTAGCG GCGGCATTTA TCCTGGGCGC TTCGGGGGTA
CAGGTCGGGA CAGCGTATCT GTTCTGCCCG GAAGCCAGCG TCAGTGCCCT GCACCGTCAG
GCGCTGCACG ATGCAACGGG CAGCCAGACC GCTCTGACCA ACCTCTTCAC CGGGCGTCCG
GCGCGAGGCA TCGTCAACCG GATCATGCGC GAAGCCGGCC CCATCAGCCC GCTCACCCCG
GCGTTTCCGC TGGCGGGCGG CGCCTTGATG CCGCTGCGCG CGCAGGCGGA AAAACTGGGC
AGCAGTGACT TCGTGAACCT CTGGGCGGGC CAGGCAGTCG GTATCAAACA TCGACTGGGA
GCCACCGAAC TGACGCGGCA ACTGGCTGAA AATGCGCTGA AAATTCTGTC TCCGCGATAA
 
Protein sequence
MSQWPDSRIT ELFAVELPLL QAPMAGASGS QMAIAVAQAG GLGALPCAML TPEKIEQEVA 
TFRQQTGNAP LNLNFFCHQP PAHDAERAER WKQSLKPYYE ELGADFDAPT PVSNRAPFDS
DSCTLIERLR PEVVSFHFGL PQPSLLDRVR ATGAKIISSA TTVEEAIWLE QHGCDAVIAM
GYEAGGHRGL FLSDQLHTQV GTFALVPQIA DATSIPVIAA GGIADGRGVA AAFILGASGV
QVGTAYLFCP EASVSALHRQ ALHDATGSQT ALTNLFTGRP ARGIVNRIMR EAGPISPLTP
AFPLAGGALM PLRAQAEKLG SSDFVNLWAG QAVGIKHRLG ATELTRQLAE NALKILSPR