Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_2755 |
Symbol | |
ID | 3368272 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | + |
Start bp | 3342992 |
End bp | 3344071 |
Gene Length | 1080 bp |
Protein Length | 359 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637653103 |
Product | 2-nitropropane dioxygenase, NPD |
Protein accession | YP_235832 |
Protein GI | 66045991 |
COG category | [R] General function prediction only |
COG ID | [COG2070] Dioxygenases related to 2-nitropropane dioxygenase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0669905 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.0255247 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTCAAT GGCCAGATAG CCGCATCACT GAACTGTTTG CCGTCGAACT GCCGCTGTTG CAAGCCCCCA TGGCGGGCGC CAGCGGATCG CAGATGGCCA TTGCTGTGGC TCAGGCTGGC GGCTTGGGGG CATTGCCCTG CGCCATGCTC ACCCCTGAGA AAATCGAACA GGAAGTAGCG ACTTTCAGGC AGCAGACCGG TAACGCTCCG CTGAACCTGA ATTTCTTCTG CCATCAGCCT CCGGCCCACG ATGCCGAGCG CGCCGAACGC TGGAAGCAGT CGCTCAAGCC CTATTACGAG GAATTGGGTG CCGATTTCGA TGCGCCGACA CCAGTCTCCA ACCGCGCGCC CTTCGACAGC GACAGCTGCA CATTGATCGA GCGCTTGAGG CCGGAAGTGG TGAGTTTCCA TTTCGGCCTT CCGCAGCCAT CGTTACTGGA TCGGGTCCGG GCCACGGGTG CAAAGATCAT CTCGTCAGCC ACCACGGTCG AGGAAGCGAT CTGGCTGGAG CAACACGGCT GCGACGCGGT GATTGCCATG GGCTACGAAG CAGGCGGCCA TCGGGGGCTG TTCCTCAGCG ATCAACTGCA CACCCAGGTC GGCACCTTTG CGCTGGTCCC GCAGATCGCT GACGCGACAA GCATCCCGGT CATCGCCGCA GGTGGTATCG CGGACGGTCG CGGTGTAGCG GCGGCATTTA TCCTGGGCGC TTCGGGGGTA CAGGTCGGGA CAGCGTATCT GTTCTGCCCG GAAGCCAGCG TCAGTGCCCT GCACCGTCAG GCGCTGCACG ATGCAACGGG CAGCCAGACC GCTCTGACCA ACCTCTTCAC CGGGCGTCCG GCGCGAGGCA TCGTCAACCG GATCATGCGC GAAGCCGGCC CCATCAGCCC GCTCACCCCG GCGTTTCCGC TGGCGGGCGG CGCCTTGATG CCGCTGCGCG CGCAGGCGGA AAAACTGGGC AGCAGTGACT TCGTGAACCT CTGGGCGGGC CAGGCAGTCG GTATCAAACA TCGACTGGGA GCCACCGAAC TGACGCGGCA ACTGGCTGAA AATGCGCTGA AAATTCTGTC TCCGCGATAA
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Protein sequence | MSQWPDSRIT ELFAVELPLL QAPMAGASGS QMAIAVAQAG GLGALPCAML TPEKIEQEVA TFRQQTGNAP LNLNFFCHQP PAHDAERAER WKQSLKPYYE ELGADFDAPT PVSNRAPFDS DSCTLIERLR PEVVSFHFGL PQPSLLDRVR ATGAKIISSA TTVEEAIWLE QHGCDAVIAM GYEAGGHRGL FLSDQLHTQV GTFALVPQIA DATSIPVIAA GGIADGRGVA AAFILGASGV QVGTAYLFCP EASVSALHRQ ALHDATGSQT ALTNLFTGRP ARGIVNRIMR EAGPISPLTP AFPLAGGALM PLRAQAEKLG SSDFVNLWAG QAVGIKHRLG ATELTRQLAE NALKILSPR
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