Gene Psyr_2741 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_2741 
Symbol 
ID3368258 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp3326933 
End bp3328123 
Gene Length1191 bp 
Protein Length396 aa 
Translation table11 
GC content65% 
IMG OID637653089 
ProductBeta-lactamase 
Protein accessionYP_235818 
Protein GI66045977 
COG category[V] Defense mechanisms 
COG ID[COG1680] Beta-lactamase class C and other penicillin binding proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.197222 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTGTCC TGAACGAGGC GGGGATACAG CGTCTTGACC ATGTCTGGCG CAGTTTCGTC 
GAGCAGGGTC GGATCGTCGG TGGCGTGCTG TTGCTGGCTC GGCATGGGCG TCTGGAATAC
GCCAGTGCGC GCGGCTGGGC CGATCGTGAA CAGCAGATTC CGGTCACCCG CCGCACGCGT
TTTCGTCTGG CCTCACTGAC CAAGCTGTTG ACCTCGGTCG CGGTGTTGCG GCTCTGCGAA
CGGGGTGTGC TGGATCTGCA CGCTTCGGTG ACGCACTGGC TGCCAGCCTT TCGACCGCAT
CTGGCCAATG GCCGCGAGCC GCTCATCACG CTGCAGCACC TGCTGTCACA CGCGTCGGGC
TTGAGCTACG GCTTTGAGCA AGCGCCCGAT AACGCTTATC AGCGCGCTGG GGTGTCGGAC
GGGCTGGATC GCGTACCGTT CGACCTGCAG GAAAACCTGA GGCGTTTGGC GCGTGTGCCC
TTGCTGTTTG AGCCCGGCAG CGCCTGGGGG TACTCGCTGG CCACGGATGT ATTGGGTGCA
GTGATCGAAC AGGCCACGGG GCTGGCGTTG TCAGAAGCCA TCGATAAATG GGTCACCGTG
CCTCTGCGCA TGCATGCGAC CTCATTCAGG CACCTGCCGG AATGTCCGCT GGCCAGCGCC
TACAAGGATG GGGTCAGTGG CCCGCAGCGT ATCGGCGATG ACGATGGGGT GTTGCTCGAC
AGCGGCCGGG CGCGGCTGTC CGCAGCCCGC GCCTTTGACT CATGCGCGTA TGAGTCGGGC
GGGGCGGGAA TGCTCGGCAC GGCTGATGAC TATCTGCGGC TGCTCGAATG CCTGCGTCTC
GGCGGCGCGC CGCTATTGAG TGAAGCCGGT ACCGCACGCT TGCTGGGCAA TGCGATCGGC
CAGACGATCA TCGCCAGCCG CGGGCCCGGC TGGAGGTTCG GGCTGGGGCC GATGATCCTT
ATCGATCCAG TGCTTGCCGG GCAGCGGCAG GGGGCGGGAA CCTGGTCGTG GTGCGGCCTG
TATGGCAGTC ATTATTGGGT CGATCCGCGT GCTGCGCTGA GCATGGTGGT CCTGACCAAC
ACGGCGGTTG CCGGCGCGTG GGGCGAGTTT GCCGACGCAA TCGTCGATGC GCTTTACCCC
AAGCTGGGGG TCAGGCCCGG GCAAATTGCT TGCGGTAGCT GCTCGGGCTG A
 
Protein sequence
MAVLNEAGIQ RLDHVWRSFV EQGRIVGGVL LLARHGRLEY ASARGWADRE QQIPVTRRTR 
FRLASLTKLL TSVAVLRLCE RGVLDLHASV THWLPAFRPH LANGREPLIT LQHLLSHASG
LSYGFEQAPD NAYQRAGVSD GLDRVPFDLQ ENLRRLARVP LLFEPGSAWG YSLATDVLGA
VIEQATGLAL SEAIDKWVTV PLRMHATSFR HLPECPLASA YKDGVSGPQR IGDDDGVLLD
SGRARLSAAR AFDSCAYESG GAGMLGTADD YLRLLECLRL GGAPLLSEAG TARLLGNAIG
QTIIASRGPG WRFGLGPMIL IDPVLAGQRQ GAGTWSWCGL YGSHYWVDPR AALSMVVLTN
TAVAGAWGEF ADAIVDALYP KLGVRPGQIA CGSCSG