| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_2734 |
|---|
| Symbol | |
|---|
| ID | 3368251 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas syringae pv. syringae B728a |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007005 |
|---|
| Strand | - |
|---|
| Start bp | 3318380 |
|---|
| End bp | 3319861 |
|---|
| Gene Length | 1482 bp |
|---|
| Protein Length | 493 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 637653082 |
|---|
| Product | aldehyde dehydrogenase |
|---|
| Protein accession | YP_235811 |
|---|
| Protein GI | 66045970 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1012] NAD-dependent aldehyde dehydrogenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.350439 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCAGCGT CTGATGGCAC CCCTCTGTTG CAACGCGCGA TTGAAGCCGA ATGCGTTTTC
AATGGCGACT GGATTCCTTC TTCATCTCCT TCCTTGCCCG TCATCGAGCC TGCGACCGGC
GAGCTGTTGA TGAACACAGC CATGGCCGAT GCCGCAGACA TTGCCGTCGC CTGTCGAGAA
GCCGCGCTGG CCCAACCTGC CTGGGCGGCG CTGGGGCCGC GTGAAAAGGC CGACATATTT
CTTCTGGCCG CCGATCATGC GGTCTGTGCG TTCGATGAAC TGGCCCTGTA TGTCGCCCGC
GAGACCGGCG GCAGCCTGCA CAAGGGCCAG CACGAAGTGA ACGAGACCAT CGTGTTGTTG
CGTCAGGCTG CGGGGATGCT GTCGCAGGCA CATGGCCATG GCCTGATACT GCCGAGTCAG
GCCGGTCGTC TGTCCTATGC GCGGCGTGTC GCGCATGGTG TGGTGGGGGT GATATCGCCG
TTCAATTTTC CTCTGGTTCT TTCCCTGCGC TCGGTCGCTC CGGCCCTTGC TGCCGGTAAT
GCCGTGGTGC TCAAACCCGA TCCGCAGACG CCGATCAGCG GCGGTTTCCT GATCGCCCGG
CTGTTCGAGG AAGCCGGCCT GCCCAAGGGG CTGCTGCACG TGCTGCCGGG TTCGGCTGAT
GCTGGCGAAG CGCTGTGCCG CGACACCAAC GTGCAGATGA TCACCTTTAC CGGTTCGACC
GGGGCCGGAC GCAAGGTTGC CGAGGCTGCG GGCCGAAACC TGAAGAAAGT GTCGCTGGAG
CTGGGCGGCA AGAATCCGCT GGTCATTCTC GAAGACGCCG ACCTTGATCT GGCCGCCAGC
AATGCGGCGT TTGGTGCCTG GCTGCACCAG GGGCAGATCT GCATGGCCAC CGGGCTGATC
CTGGTGCACG AATCCATTGT CGCCGACCTG ACCCGCAAGC TGGCGGACAA GGCGCGGGCG
CTGACGGTGG GTAACGCGGC ACGCGGTGAG GCTGCTCTGG GGCCGCTGAT CAACAAACGG
CAGTTGCAGC ACGTGCATCA AGTCGTCAGT GACAGCCTGC AGGCCGGTGC GCGACTGGAA
ACCGGTGGCG AGTATGAAGG CCTGTTCTAT CGACCGACCG TGCTCAGCGG CGTGAAACCC
GGCATGCGCG CATTCGACGA AGAGATTTTT GGCCCGGTGG CCGTTGTGGT CAGTTTTTCC
ACAGACGAGG AAGCCATCGA ACTAGCCAAT CGTTCCGAGT ATGGCCTGGC GGCTGCGGTG
ATTTCCCCGG ACGTCGGCCG CGCGACGGCA ATTGGCGACC GACTCAAGTG CGGCATGTTG
CACATCAACG ATCAGACAGT GGCCGATGAG TGTGTCAACT CGTTCGGCGG GCGCGGTGCG
TCGGGCAACG GCAGCAGTGC TGGCAGCCCC TCGGACTGGG ATGAATACAG CCAATGGCAG
TGGGTGACGG TGAAGAACCA GGCACCGGCC TATCCATTCT GA
|
|---|
| Protein sequence | MSASDGTPLL QRAIEAECVF NGDWIPSSSP SLPVIEPATG ELLMNTAMAD AADIAVACRE
AALAQPAWAA LGPREKADIF LLAADHAVCA FDELALYVAR ETGGSLHKGQ HEVNETIVLL
RQAAGMLSQA HGHGLILPSQ AGRLSYARRV AHGVVGVISP FNFPLVLSLR SVAPALAAGN
AVVLKPDPQT PISGGFLIAR LFEEAGLPKG LLHVLPGSAD AGEALCRDTN VQMITFTGST
GAGRKVAEAA GRNLKKVSLE LGGKNPLVIL EDADLDLAAS NAAFGAWLHQ GQICMATGLI
LVHESIVADL TRKLADKARA LTVGNAARGE AALGPLINKR QLQHVHQVVS DSLQAGARLE
TGGEYEGLFY RPTVLSGVKP GMRAFDEEIF GPVAVVVSFS TDEEAIELAN RSEYGLAAAV
ISPDVGRATA IGDRLKCGML HINDQTVADE CVNSFGGRGA SGNGSSAGSP SDWDEYSQWQ
WVTVKNQAPA YPF
|
|---|
| |