Gene Psyr_2730 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_2730 
Symbol 
ID3368247 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp3313111 
End bp3314433 
Gene Length1323 bp 
Protein Length440 aa 
Translation table11 
GC content60% 
IMG OID637653078 
Productouter membrane porin 
Protein accessionYP_235807 
Protein GI66045966 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.530004 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGAAGC TCGCTCATGA TGCAGCAAGC ACTGTGTCAG CTCCCTTTTT TCGTGGAAAA 
CGTTGTGGCC TTGCGCTGGG CCTGCTGGGT ATCAGTGCCA TTCCCGACCC GTCACAGGCG
CAGGGTTTTC TGGATGACAG CCATGGCACA CTGACGCTGC GCAACTATTA TATGGACCGC
GATTACAAGG ATGATGGCAC CAGGACTGCG ACTCGGGAGT GGGCGCAGGG CTTCATCATG
AATGCGGAGT CCGGCTTTAC CCAAGGGCCG GTGGGGTTCG GCCTCGATGC GCGAGCGCTG
GTCGGCGTGA AGCTGGATTC CTCGCCAGAC CGCAGCGGCA CCGAGCTGTT GCCGGTATCC
GCCAGTGATG GCCGGGCGGC TGACGAGTAT TCGCGGCTGG CCCTGACCGG CAAGCTGAAA
TTCCACGAAA CCACGCTCAA GACCGGTGAC GTGTCGATTT TCCTGCCATT CGCCTTCGCC
AGCCCCTCGC GACTGTTGCC GCAGACCTTC CGTGGCACCA CGCTGACCTC GAAGGATATA
GATGACCTGA CCCTCCATGC GGGCTACATC GACCGCGTCA ACAAGCGTGA CTCCAGCAAC
TACCAGCCCA TCAGCATCGC TTCACCGAAC CGCCGTTTCA ACGGGGCGGC AACGTCGTCG
CACATGGCTT ATGCCGGAGG CGATTATCAG GTCAACAAGG ACCTGAGCCT GCGTGTGTAT
CACGCCGAAG TAGACGATCT CTATACCCAG AACACTCTGG CCCTGTTGCA CAAGCTGGCG
ATTGGCGACG GCGAACTGAC CACCGATCTG CGCAGCTTTT TCAGCCGCGA TACCGGCAGC
GCGAAAGCCG GCGAAGTCGA CAACCAGAAC CTGTCCGCGT TGCTCGGCTA CAGGTGGGGA
GGGCACAGCG TCAGCCTTGG CTACATGCAT TCCAGTGGCG ACACGGCGAC GCCTTATGTC
TCGGGCACCG AGCTGATGGG GCTGAGCGAG ATGACCATGA GCTCTGACTT CCTCAACGCC
AAGGAGCGCA CCTGGCAAGC TATCTACGAC TATGACTTCA CGGCGGTCGG GCTGGTCGGG
CTGCGCAGTC GCCTGCGTTA TGTGCGCGGC GACAACATCG AGCTGGCCGC TTTCAATGCC
GATGATCGCA AGGAGCGTGA GTTTCAGATG GAGCTGGGCT ACGTTGTGCA AAGCGGTCCA
CTGAAGAACG TCGGGCTGCT GGCGCGCAAG TCGATCTATC GCAACGATTT CCCGGCAGGT
GCAGCCTTTC GTGACGAGAA CCAGACACGC TTCATCGTGC AATACAGCTT GCCGCTCTGG
TAA
 
Protein sequence
MSKLAHDAAS TVSAPFFRGK RCGLALGLLG ISAIPDPSQA QGFLDDSHGT LTLRNYYMDR 
DYKDDGTRTA TREWAQGFIM NAESGFTQGP VGFGLDARAL VGVKLDSSPD RSGTELLPVS
ASDGRAADEY SRLALTGKLK FHETTLKTGD VSIFLPFAFA SPSRLLPQTF RGTTLTSKDI
DDLTLHAGYI DRVNKRDSSN YQPISIASPN RRFNGAATSS HMAYAGGDYQ VNKDLSLRVY
HAEVDDLYTQ NTLALLHKLA IGDGELTTDL RSFFSRDTGS AKAGEVDNQN LSALLGYRWG
GHSVSLGYMH SSGDTATPYV SGTELMGLSE MTMSSDFLNA KERTWQAIYD YDFTAVGLVG
LRSRLRYVRG DNIELAAFNA DDRKEREFQM ELGYVVQSGP LKNVGLLARK SIYRNDFPAG
AAFRDENQTR FIVQYSLPLW