| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_2728 |
|---|
| Symbol | |
|---|
| ID | 3368245 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas syringae pv. syringae B728a |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007005 |
|---|
| Strand | - |
|---|
| Start bp | 3311551 |
|---|
| End bp | 3312381 |
|---|
| Gene Length | 831 bp |
|---|
| Protein Length | 276 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 637653076 |
|---|
| Product | p-hydroxycinnamoyl CoA hydratase/lyase |
|---|
| Protein accession | YP_235805 |
|---|
| Protein GI | 66045964 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG1024] Enoyl-CoA hydratase/carnithine racemase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.0237871 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.744174 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCAAAT ATGAAGGTCG CTGGTCAACC ATCAAGGTCG AGATCGAGCA AGGTATTGCG
TGGGTCATCC TCAATCGGCC GGAAAAGCGC AACGCCATGA GCCCGACCCT GAACCGCGAA
ATGATCGATG TGCTGGAAAC CCTCGAGCAG GATCCCGATG CGGGGGTTCT GGTGCTGACC
GGTGCGGGTG AGGCGTGGAC CGCTGGCATG GACCTCAAGG AGTACTTCCG CGAGGTGGAT
GCCGGACCGG AAATTCTTCA GGAAAAAATC CGGCGCGAAG CCTCCCAGTG GCAGTGGAAG
ATGTTACGCA TGTACGCCAA GCCAACCATC GCAATGGTCA ACGGCTGGTG CTTTGGTGGT
GGTTTCAGCC CGCTGGTGGC CTGTGATCTG GCGATCTGCG CCGATGAAGC GACCTTCGGC
CTGTCGGAAA TCAACTGGGG CATTCCGCCC GGCAACCTGG TGAGCAAGGC CATGGCCGAC
ACCGTGGGCC ACCGCCAGTC GCTGTACTAC ATCATGACCG GCAAAACCTT CAATGGTCAG
AAGGCCGCTG AAATGGGCCT CGTCAATGAA AGCGTACCGC TGGCGCAACT GCGTCAGGTG
GCCATCGATC TGGCCAATAA TCTGCTGGAA AAAAATCCGG TGGTGCTGCG CGCCGCCAAG
CACGGCTTCA AACGCTGCCG CGAACTGACC TGGGAGCAGA ACGAAGACTA CCTGTACGCC
AAGCTCGACC AGTCACGTCT GCTGGACAAG GAAGGCGGGC GCGAGCAGGG CATGAAGCAG
TTCCTCGATG ACAAGAGCAT CAAGCCCGGC CTGGAAGCTT ATAAACGCTA G
|
|---|
| Protein sequence | MSKYEGRWST IKVEIEQGIA WVILNRPEKR NAMSPTLNRE MIDVLETLEQ DPDAGVLVLT
GAGEAWTAGM DLKEYFREVD AGPEILQEKI RREASQWQWK MLRMYAKPTI AMVNGWCFGG
GFSPLVACDL AICADEATFG LSEINWGIPP GNLVSKAMAD TVGHRQSLYY IMTGKTFNGQ
KAAEMGLVNE SVPLAQLRQV AIDLANNLLE KNPVVLRAAK HGFKRCRELT WEQNEDYLYA
KLDQSRLLDK EGGREQGMKQ FLDDKSIKPG LEAYKR
|
|---|
| |