Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_2715 |
Symbol | |
ID | 3368232 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | + |
Start bp | 3297028 |
End bp | 3298422 |
Gene Length | 1395 bp |
Protein Length | 464 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637653063 |
Product | major facilitator transporter |
Protein accession | YP_235792 |
Protein GI | 66045951 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2271] Sugar phosphate permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.528034 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATGGGA GTCGCCTCTT GAATACCGTC CCTGGTACTA CGGACGTCAC GGTGCTTGCC CGTGCGGCCG CCAAGGTGAA ACGCCACGTG CTGCCGCTGT TCGTGGTGAT GTTCATCGTC AATTACATCG ACCGGGTCAA TATCGGTTTC GTACGCAGCC ATCTGGAAAC CGATCTGGGT ATCGGCGCAG CGGCCTACGG GCTGGGTGCA GGATTGTTCT TTGTCGGTTA CGCGCTGTTC GAAGTCCCCT CCAACATGCT GTTGCAGCGC TACGGTGCCC GCGCCTGGCT GACCCGTATC ATGTTCACCT GGGGCGCGGC CGCCATGGCC ATGGCGTTCG TCCAGGGCGA AACCAGCTTT TACGTGCTGC GCTTCATTCT GGGCGCCGCC GAAGCCGGTT TCTTCCCCGG CATCATCTAT TACTTCACCC AATGGCTACC CTCAAGTGAC CGCGGCAAGG CCATGGCGCT GTTTCTCAGC GGCTCGGCGA TAGCCTCGGT GATTTCCGGA CCGGTGTCCG GCGCCCTGCT CGGTCTCGAG GGCATGAACC TGCATGGCTG GCAGTGGATG TTCCTGATCG AAGGCTTCGC GTCGATCGTG CTCTGCGGTT TCGTGTGGTT CTGGCTGCAA TCACATCCTC ATGAAGCCCG CTGGCTCAGT GACGAAGAAA AAACCGCGCT CAGCACCGCC ATCGCCGAAG AGCAACGGCT GCGCGAAGCT TCACAAACCG TCAGACCTTC GGTATTCCGA CTGTTGGCGG ACCGGCAGAT CCTGCTGTTC TGCTTCATCT ACTTTTCCGT GGCACTGACC ATCTATGGCG CCACCTTCTG GCTGCCGAGC ATGATCCGCA AGATGGGCAG TTTCAGCGAT TTCGAGGTCG GGCTGTTCAA TTCGATCCCG TGGATCATCT CGATTGTGGC CATGTACGGC TTCGCAGCCC TGGCCGCACG CTTCAAGCAC CAGCAGGCCT GGGTGGCGGT TACCCTGGTC ATCGCCGCCG CCGGCATGTT CATGTCCACG GTGGGCGGTC CGGTGTTCGC CTTTGTCGCC ATCTGCTTCG CGGCAATCGG TTTCAAGGCC GCGTCTGCGC TGTTCTGGCC AATCCCTCAA GGCTATCTGG ATGCACGCAT TGCTGCTGCG GTCATTGCGC TGATCAACTC CATCGGCAAC CTGGGCGGTT TCGTCGCACC GACCACGTTC GGCTTTCTGG AACAGACCAC CGGTTCGATT CAGGGCGGTC TGTATGGCCT GGCAGCGACA TCGCTGCTCG CTGCCGTGGT GATCTTCTTC GCCCGCACCA CGCCACGCGG TGACCGCGGC CGCCCGTCCA GGGCTGAGCG GCCCGCAGCG CTCAGCCCTG CCGTCAATGG CACCCCTTCC AGCCTCAAAC CCTGA
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Protein sequence | MNGSRLLNTV PGTTDVTVLA RAAAKVKRHV LPLFVVMFIV NYIDRVNIGF VRSHLETDLG IGAAAYGLGA GLFFVGYALF EVPSNMLLQR YGARAWLTRI MFTWGAAAMA MAFVQGETSF YVLRFILGAA EAGFFPGIIY YFTQWLPSSD RGKAMALFLS GSAIASVISG PVSGALLGLE GMNLHGWQWM FLIEGFASIV LCGFVWFWLQ SHPHEARWLS DEEKTALSTA IAEEQRLREA SQTVRPSVFR LLADRQILLF CFIYFSVALT IYGATFWLPS MIRKMGSFSD FEVGLFNSIP WIISIVAMYG FAALAARFKH QQAWVAVTLV IAAAGMFMST VGGPVFAFVA ICFAAIGFKA ASALFWPIPQ GYLDARIAAA VIALINSIGN LGGFVAPTTF GFLEQTTGSI QGGLYGLAAT SLLAAVVIFF ARTTPRGDRG RPSRAERPAA LSPAVNGTPS SLKP
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