Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_2710 |
Symbol | |
ID | 3368227 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | - |
Start bp | 3291199 |
End bp | 3291909 |
Gene Length | 711 bp |
Protein Length | 236 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637653058 |
Product | transcriptional regulator GntR |
Protein accession | YP_235787 |
Protein GI | 66045946 |
COG category | [K] Transcription |
COG ID | [COG1802] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.0839086 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.32208 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCAAAC CCGGGCAGAC CGTCCTTGTT GCGCTGCGCA AGATGATCGC ATCAGGCGAG CTGGCTGCCG GTGAGCGCCT GATGGAGGTG CCGACCGCCG AGCTGTTCGG CGTGTCGCGC ATGCCGGTGC GCATGGCGTT CCGCACGCTG GAGCAGGAAG GGCTGCTGGT GCCCTTTGGC GGGCGTGGAT TTCAGGTGCG TTTGATCAGC CCGATGGAAA TCGCCGGTGC GGTGGATGTC CGCGGTGTCC TGGAGGGGCT TGCTGCGCGG CAAATGGCCG AGCGCGGCGT GACCCAGGAG GCGCGCGACG AACTGGAGGC CTGTCTGGTG CAGGGTGACG CGCTGTTCGA GAAAGGCCAT GTCACTGAAG ATGACCTTGA GGTCTATCAC GACATGAACA TGCGTCTGCA TCGCGTGATC GTCGAGGGCA GCGGAAATCG CGCCATTGCC GATGCACTGT CGCGCAACGA CCATCTGCCT TTTGCCTCGG TGACCGCGCT GGCCGTGGAT CGCGACAACC TGATTCGCGA ATACCGGCGG TTCAATTTCG CCCACATGCA GCATCACGCC GTGGTGGATG CGCTGGTCAA CGGGCAGGGC GCTCGCGCCG AGGCCATCAT GCGCGAGCAT GCCAACGCCA CCTTGCGCTA TGCGGAAATC TTCGGCGCCG GGCAGAACGA GCGCGTGAAG GTCATTCAGC GCCCGGACTG A
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Protein sequence | MSKPGQTVLV ALRKMIASGE LAAGERLMEV PTAELFGVSR MPVRMAFRTL EQEGLLVPFG GRGFQVRLIS PMEIAGAVDV RGVLEGLAAR QMAERGVTQE ARDELEACLV QGDALFEKGH VTEDDLEVYH DMNMRLHRVI VEGSGNRAIA DALSRNDHLP FASVTALAVD RDNLIREYRR FNFAHMQHHA VVDALVNGQG ARAEAIMREH ANATLRYAEI FGAGQNERVK VIQRPD
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