Gene Psyr_2710 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_2710 
Symbol 
ID3368227 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp3291199 
End bp3291909 
Gene Length711 bp 
Protein Length236 aa 
Translation table11 
GC content64% 
IMG OID637653058 
Producttranscriptional regulator GntR 
Protein accessionYP_235787 
Protein GI66045946 
COG category[K] Transcription 
COG ID[COG1802] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0839086 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.32208 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCAAAC CCGGGCAGAC CGTCCTTGTT GCGCTGCGCA AGATGATCGC ATCAGGCGAG 
CTGGCTGCCG GTGAGCGCCT GATGGAGGTG CCGACCGCCG AGCTGTTCGG CGTGTCGCGC
ATGCCGGTGC GCATGGCGTT CCGCACGCTG GAGCAGGAAG GGCTGCTGGT GCCCTTTGGC
GGGCGTGGAT TTCAGGTGCG TTTGATCAGC CCGATGGAAA TCGCCGGTGC GGTGGATGTC
CGCGGTGTCC TGGAGGGGCT TGCTGCGCGG CAAATGGCCG AGCGCGGCGT GACCCAGGAG
GCGCGCGACG AACTGGAGGC CTGTCTGGTG CAGGGTGACG CGCTGTTCGA GAAAGGCCAT
GTCACTGAAG ATGACCTTGA GGTCTATCAC GACATGAACA TGCGTCTGCA TCGCGTGATC
GTCGAGGGCA GCGGAAATCG CGCCATTGCC GATGCACTGT CGCGCAACGA CCATCTGCCT
TTTGCCTCGG TGACCGCGCT GGCCGTGGAT CGCGACAACC TGATTCGCGA ATACCGGCGG
TTCAATTTCG CCCACATGCA GCATCACGCC GTGGTGGATG CGCTGGTCAA CGGGCAGGGC
GCTCGCGCCG AGGCCATCAT GCGCGAGCAT GCCAACGCCA CCTTGCGCTA TGCGGAAATC
TTCGGCGCCG GGCAGAACGA GCGCGTGAAG GTCATTCAGC GCCCGGACTG A
 
Protein sequence
MSKPGQTVLV ALRKMIASGE LAAGERLMEV PTAELFGVSR MPVRMAFRTL EQEGLLVPFG 
GRGFQVRLIS PMEIAGAVDV RGVLEGLAAR QMAERGVTQE ARDELEACLV QGDALFEKGH
VTEDDLEVYH DMNMRLHRVI VEGSGNRAIA DALSRNDHLP FASVTALAVD RDNLIREYRR
FNFAHMQHHA VVDALVNGQG ARAEAIMREH ANATLRYAEI FGAGQNERVK VIQRPD