Gene Psyr_2708 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_2708 
Symbol 
ID3368225 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp3289110 
End bp3290174 
Gene Length1065 bp 
Protein Length354 aa 
Translation table11 
GC content62% 
IMG OID637653056 
ProductRieske [2Fe-2S] region 
Protein accessionYP_235785 
Protein GI66045944 
COG category[P] Inorganic ion transport and metabolism
[R] General function prediction only 
COG ID[COG4638] Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.104354 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0620392 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACCCGA AAAATGCGTG GTACGTCGCT TGCACAGCGG ATGAAGTCGC CGACAAGCCT 
CTGGGCCGGC AGATCTGCAA CGAAAAGATG GTGTTCTATC GCGACCAGAA CCAGCAGGTC
GTGGCCGTCG AAGACTTCTG CCCGCATCGC GGCGCCCCGC TCTCGCTGGG CTATGTCGAG
AACGGCCAGC TGGTGTGTGG TTACCACGGG CTGGTCATGG GCGGCGACGG CAAGACTGTT
TCGATGCCCG GCCAGCGTGT TCGCGGCTTC CCTTGCAACA AGACCTTCGC CGCGGTCGAG
CGCTACGGCT TCATCTGGGT CTGGCCCGGT GACCGGGAAA AAGCCGACCC GGCACTCATT
CATCACCTGG AGTGGGCAGT CAGCGACGAA TGGGCCTACG GCGGCGGGCT GTTTCATATC
CAGTGCGACT ACCGCCTGAT GATCGACAAC CTGATGGACC TCACTCACGA AACCTACGTG
CATGCGTCAA GCATCGGCCA GAAGGAAATC GACGAGGCAG CGCCCGTCAC AACGGTCGAA
GGCGAGGAAG TGGTCACCGC CCGGCACATG GAAAACATCA TGCCGCCGCC GTTCTGGCAG
ATGGCATTGC GTGGCAACAA TCTGGCCGAT GACGTGCCGG TCGATCGCTG GCAGATCTGC
CGCTTCACGC CGCCCAGTCA TGTGCTGATC GAAGTCGGCG TCGCCCATGC GGGCAAAGGC
GGCTATGACG CGCCTAAGGA GTTCAAGGCG TCGAGCATCG TCGTCGACTT CATCACCCCC
GAGACCGACA CGTCCATCTG GTACTTCTGG GGCATGGCGC GCAACTTCAA TCCGGCCGAC
GAAGCGCTGA CTGCCAGCAT CCGTGAAGGC CAGGGCAAGA TCTTCACCGA AGACCTGGAA
ATGCTTGAGC GCCAGCAACA GAACCTGCTT CAGCATCCGC ATCGCAACCT GCTCAAGCTC
AATATCGACG CCGGTGGCGT GCAGTCACGC AAGATTCTGG AGCGGCTGAT CGCTGCCGAG
CAGGCCGGTC CCGGCGAGCA GATTCCCGTG ATGGCGACGA AATGA
 
Protein sequence
MHPKNAWYVA CTADEVADKP LGRQICNEKM VFYRDQNQQV VAVEDFCPHR GAPLSLGYVE 
NGQLVCGYHG LVMGGDGKTV SMPGQRVRGF PCNKTFAAVE RYGFIWVWPG DREKADPALI
HHLEWAVSDE WAYGGGLFHI QCDYRLMIDN LMDLTHETYV HASSIGQKEI DEAAPVTTVE
GEEVVTARHM ENIMPPPFWQ MALRGNNLAD DVPVDRWQIC RFTPPSHVLI EVGVAHAGKG
GYDAPKEFKA SSIVVDFITP ETDTSIWYFW GMARNFNPAD EALTASIREG QGKIFTEDLE
MLERQQQNLL QHPHRNLLKL NIDAGGVQSR KILERLIAAE QAGPGEQIPV MATK